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Searching for geometric objects that are close in space is a fundamental component of many applications. The performance of search algorithms comes to the forefront as the size of a problem increases both in terms of total object count as…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-06-30 D. Lebrun-Grandié , A. Prokopenko , B. Turcksin , S. R. Slattery

We present an accelerated algorithm for hierarchical density based clustering. Our new algorithm improves upon HDBSCAN*, which itself provided a significant qualitative improvement over the popular DBSCAN algorithm. The accelerated HDBSCAN*…

Machine Learning · Statistics 2018-12-20 Leland McInnes , John Healy

Density-based clustering has found numerous applications across various domains. The Density-Based Spatial Clustering of Applications with Noise (DBSCAN) algorithm is capable of finding clusters of varied shapes that are not linearly…

Databases · Computer Science 2019-12-03 Vinayak Mathur , Jinesh Mehta , Sanjay Singh

This paper provides an overview of the 2.0 release of the ArborX library, a performance portable geometric search library based on Kokkos. We describe the major changes in ArborX 2.0 including a new interface for the library to support a…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-02-06 Andrey Prokopenko , Daniel Arndt , Damien Lebrun-Grandié , Bruno Turcksin

Remarkable observational advances have established a compelling cross-validated model of the Universe. Yet, two key pillars of this model -- dark matter and dark energy -- remain mysterious. Sky surveys that map billions of galaxies to…

Distributed, Parallel, and Cluster Computing · Computer Science 2012-11-28 Salman Habib , Vitali Morozov , Hal Finkel , Adrian Pope , Katrin Heitmann , Kalyan Kumaran , Tom Peterka , Joe Insley , David Daniel , Patricia Fasel , Nicholas Frontiere , Zarija Lukic

DBSCAN, a well-known density-based clustering algorithm, has gained widespread popularity and usage due to its effectiveness in identifying clusters of arbitrary shapes and handling noisy data. However, it encounters challenges in producing…

Machine Learning · Computer Science 2025-05-09 Hao Peng , Xiang Huang , Shuo Sun , Ruitong Zhang , Philip S. Yu

Turning the current experimental plasma accelerator state-of-the-art from a promising technology into mainstream scientific tools depends critically on high-performance, high-fidelity modeling of complex processes that develop over a wide…

Accelerator Physics · Physics 2018-12-26 J. -L. Vay , A. Almgren , J. Bell , L. Ge , D. P. Grote , M. Hogan , O. Kononenko , R. Lehe , A. Myers , C. Ng , J. Park , R. Ryne , O. Shapoval , M. Thevenet , W. Zhang

Density-based spatial clustering of applications with noise (DBSCAN) is a data clustering algorithm which has the high-performance rate for dataset where clusters have the constant density of data points. One of the significant attributes…

The applications being developed within the U.S. Exascale Computing Project (ECP) to run on imminent Exascale computers will generate scientific results with unprecedented fidelity and record turn-around time. Many of these codes are based…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-08-04 Lipeng Wan , Axel Huebl , Junmin Gu , Franz Poeschel , Ana Gainaru , Ruonan Wang , Jieyang Chen , Xin Liang , Dmitry Ganyushin , Todd Munson , Ian Foster , Jean-Luc Vay , Norbert Podhorszki , Kesheng Wu , Scott Klasky

High performance computing numerical simulations are today one of the more effective instruments to implement and study new theoretical models, and they are mandatory during the preparatory phase and operational phase of any scientific…

Instrumentation and Methods for Astrophysics · Physics 2019-04-29 Giuliano Taffoni , Giuseppe Murante , Luca Tornatore , David Goz , Stefano Borgani , Manolis Katevenis , Nikolaos Chrysos , Manolis Marazakis

In recent years, significant advances have been made in exoplanet and brown dwarf observations. By using state-of-the-art models, astronomers can determine properties of their atmospheres, such as temperatures, the presence of clouds, or…

Instrumentation and Methods for Astrophysics · Physics 2025-10-27 Sam de Regt , Siddharth Gandhi , Louis Siebenaler , Darío González Picos

Current and future surveys of large-scale cosmic structure are associated with a massive and complex datastream to study, characterize, and ultimately understand the physics behind the two major components of the 'Dark Universe', dark…

Context. New-generation cosmological simulations are providing huge amounts of data, whose analysis becomes itself a cutting-edge computational problem. In particular, the identification of gravitationally bound structures, known as halo…

Instrumentation and Methods for Astrophysics · Physics 2022-08-10 David Vallés-Pérez , Susana Planelles , Vicent Quilis

Resolving the most fundamental questions in cosmology requires simulations that match the scale, fidelity, and physical complexity demanded by next-generation sky surveys. To achieve the realism needed for this critical scientific…

DBSCAN is a well-known density-based clustering algorithm to discover arbitrary shape clusters. While conceptually simple in serial, the algorithm is challenging to efficiently parallelize on manycore GPU architectures. Common pitfalls,…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-06-30 Andrey Prokopenko , Damien Lebrun-Grandie , Daniel Arndt

Developing complex, reliable advanced accelerators requires a coordinated, extensible, and comprehensive approach in modeling, from source to the end of beam lifetime. We present highlights in Exascale Computing to scale accelerator…

Co-exploration of an optimal neural architecture and its hardware accelerator is an approach of rising interest which addresses the computational cost problem, especially in low-profile systems. The large co-exploration space is often…

Machine Learning · Computer Science 2023-01-24 Deokki Hong , Kanghyun Choi , Hye Yoon Lee , Joonsang Yu , Noseong Park , Youngsok Kim , Jinho Lee

The upcoming exascale era will push the changes in computing architecture from classical CPU-based systems in hybrid GPU-heavy systems with much higher levels of complexity. While such clusters are expected to improve the performance of…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-09-11 Maximilian Höb , Dieter Kranzlmüller

The architecture of Exascale computing facilities, which involves millions of heterogeneous processing units, will deeply impact on scientific applications. Future astrophysical HPC applications must be designed to make such computing…

Instrumentation and Methods for Astrophysics · Physics 2017-12-04 D. Goz , L. Tornatore , G. Taffoni , G. Murante
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