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Large Language Models (LLMs) have transformed natural language processing and hold growing promise for advancing science, healthcare, and decision-making. Yet their training paradigms remain dominated by affirmation-based inference, akin to…

Artificial Intelligence · Computer Science 2025-12-05 Peter B. Walker , Hannah Davidson , Aiden Foster , Matthew Lienert , Thomas Pardue , Dale Russell

Fueled by breakthrough technology developments, the biological, biomedical, and behavioral sciences are now collecting more data than ever before. There is a critical need for time- and cost-efficient strategies to analyze and interpret…

Dataspaces have recently gained adoption across various sectors, including traditionally less digitized domains such as culture. Leveraging Semantic Web technologies helps to make dataspaces FAIR, but their complexity poses a significant…

Computation and Language · Computer Science 2024-03-26 Benedikt T. Arnold , Johannes Theissen-Lipp , Diego Collarana , Christoph Lange , Sandra Geisler , Edward Curry , Stefan Decker

Following its success for vision and text, the "foundation model" (FM) paradigm -- pretraining large models on massive data, then fine-tuning on target tasks -- has rapidly expanded to domains in the sciences, engineering, healthcare, and…

Machine Learning · Computer Science 2025-03-24 Zongzhe Xu , Ritvik Gupta , Wenduo Cheng , Alexander Shen , Junhong Shen , Ameet Talwalkar , Mikhail Khodak

Multimodal Large Language Models (MLLMs) have tremendous potential to improve the accuracy, availability, and cost-effectiveness of healthcare by providing automated solutions or serving as aids to medical professionals. Despite promising…

Computer Vision and Pattern Recognition · Computer Science 2025-05-22 Mohammad Shahab Sepehri , Zalan Fabian , Maryam Soltanolkotabi , Mahdi Soltanolkotabi

Large language models (LLMs) show promise for clinical use. They are often evaluated using datasets such as MedQA. However, Many medical datasets, such as MedQA, rely on simplified Question-Answering (Q\A) that underrepresents real-world…

Computation and Language · Computer Science 2025-10-24 Yunpeng Xiao , Carl Yang , Mark Mai , Xiao Hu , Kai Shu

Experiments in research on memory, language, and in other areas of cognitive science are increasingly being analyzed using Bayesian methods. This has been facilitated by the development of probabilistic programming languages such as Stan,…

Methodology · Statistics 2020-03-02 Daniel J. Schad , Michael Betancourt , Shravan Vasishth

There is an increasing interest in leveraging Large Language Models (LLMs) for managing structured data and enhancing data science processes. Despite the potential benefits, this integration poses significant questions regarding their…

Artificial Intelligence · Computer Science 2023-11-21 Nathalia Nascimento , Cristina Tavares , Paulo Alencar , Donald Cowan

Large language models (LLMs) are increasingly used in healthcare, yet standardised benchmarks for evaluating guideline-based clinical reasoning are missing. This study introduces a validated dataset derived from publicly available…

Computation and Language · Computer Science 2025-11-04 Qing Ding , Eric Hua Qing Zhang , Felix Jozsa , Julia Ive

As machine learning becomes more widespread and is used in more critical applications, it's important to provide explanations for these models, to prevent unintended behavior. Unfortunately, many current interpretability methods struggle…

Computation and Language · Computer Science 2024-11-28 Andreas Madsen

Computational pathology, which involves analyzing whole slide images for automated cancer diagnosis, relies on multiple instance learning, where performance depends heavily on the feature extractor and aggregator. Recent Pathology…

Computer Vision and Pattern Recognition · Computer Science 2025-05-22 Conghao Xiong , Hao Chen , Joseph J. Y. Sung

Vision foundation models (FMs) are accelerating the development of digital pathology algorithms and transforming biomedical research. These models learn, in a self-supervised manner, to represent histological features in highly…

As large language models (LLMs) are adapted to sensitive domains such as medicine, their fluency raises safety risks, particularly regarding provenance and accountability. Watermarking embeds detectable patterns to mitigate these risks, yet…

Computation and Language · Computer Science 2025-09-23 Rochana Prih Hastuti , Rian Adam Rajagede , Mansour Al Ghanim , Mengxin Zheng , Qian Lou

Although the applications of artificial intelligence especially deep learning had greatly improved various aspects of intelligent manufacturing, they still face challenges for wide employment due to the poor generalization ability,…

Artificial Intelligence · Computer Science 2023-12-27 Haotian Zhang , Semujju Stuart Dereck , Zhicheng Wang , Xianwei Lv , Kang Xu , Liang Wu , Ye Jia , Jing Wu , Zhuo Long , Wensheng Liang , X. G. Ma , Ruiyan Zhuang

Foundation models (FMs), such as GPT-4 and AlphaFold, are reshaping the landscape of scientific research. Beyond accelerating tasks such as hypothesis generation, experimental design, and result interpretation, they prompt a more…

Machine Learning · Computer Science 2025-10-20 Fan Liu , Jindong Han , Tengfei Lyu , Weijia Zhang , Zhe-Rui Yang , Lu Dai , Cancheng Liu , Hao Liu

Pathology Foundation Models (FMs) hold great promise for healthcare. Before they can be used in clinical practice, it is essential to ensure they are robust to variations between medical centers. We measure whether pathology FMs focus on…

Machine Learning · Computer Science 2025-02-04 Edwin D. de Jong , Eric Marcus , Jonas Teuwen

To address challenges in the digital economy's landscape of digital intelligence, large language models (LLMs) have been developed. Improvements in computational power and available resources have significantly advanced LLMs, allowing their…

Computation and Language · Computer Science 2024-05-24 Yanxin Zheng , Wensheng Gan , Zefeng Chen , Zhenlian Qi , Qian Liang , Philip S. Yu

Machine Learning (ML) research has increased substantially in recent years, due to the success of predictive modeling across diverse application domains. However, well-known barriers exist when attempting to deploy ML models in high-stakes,…

Machine Learning · Computer Science 2024-09-19 Nathan Wolfrath , Joel Wolfrath , Hengrui Hu , Anjishnu Banerjee , Anai N. Kothari

This paper addresses the current lack of a unified formal framework in machine learning theory, as well as the absence of robust theoretical foundations for interpretability and ethical safety assurance. We first construct a formal…

Logic in Computer Science · Computer Science 2025-11-11 Jianfeng Xu
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