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Related papers: Mechanosensitive ion channels: Old but new

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Software-defined metasurfaces are electromagnetically ultra-thin, artificial components that can provide engineered and externally controllable functionalities. The control over these functionalities is enabled by the metasurface…

We propose a novel tensor-based formalism for inferring causal structures from time series. An information theoretical analysis of transfer entropy, shows that transfer entropy results from transmission of information over a set of…

Information Theory · Computer Science 2020-04-22 David Sigtermans

It has long been accepted that the multiple-ion single-file transport model is appropriate for many kinds of ion channels. However, most of the purely theoretical works in this field did not capture all of the important features of the…

Biological Physics · Physics 2013-09-02 Kuo Kan Liang

Mixed ionic-electronic conductors host tightly coupled interactions among mobile ions, electronic charges, and the polymer matrix, giving rise to complex multimodal responses spanning electrical, mechanical, and morphological…

Cells receive signaling molecules by receptors and relay information via sensory networks so that they can respond properly depending on the type of signal. Recent studies have shown that cells can extract multi-dimensional information from…

Biological Physics · Physics 2018-02-14 Yoshihiko Hasegawa

One of the most celebrated successes in computational biology is the Hodgkin-Huxley framework for modeling electrically active cells. This framework, expressed through a set of differential equations, synthesizes the impact of ionic…

Neurons and Cognition · Quantitative Biology 2015-05-28 Joshua H. Goldwyn , Eric Shea-Brown

Motivated by on-chip communication, a channel model is proposed where the variance of the additive noise depends on the weighted sum of the past channel input powers. For this channel, an expression for the capacity per unit cost is…

Information Theory · Computer Science 2007-07-13 Tobias Koch , Amos Lapidoth , Paul P. Sotiriadis

The paper shows how the diffusive movement of ions through a channel protein can be described as a chemical reaction over an arbitrary shaped potential barrier. The result is simple and intuitive but without approximation beyond the…

Biomolecules · Quantitative Biology 2008-07-10 Bob Eisenberg

We consider heat conduction in a 1D dynamical channel. The channel consists of a group of noninteracting particles, which move between two heat baths according to some dynamical process. We show that the essential thermodynamic properties…

Statistical Mechanics · Physics 2009-11-10 S. Denisov , J. Klafter , M. Urbakh

Both action potentials and mechanosensitive signalling are an important communication mechanisms in plants. Considering an information theoretic framework, this paper explores the effective range of multiple action potentials for a long…

Molecular Networks · Quantitative Biology 2019-11-13 Hamdan Awan , Kareem Zeid , Raviraj S. Adve , Nigel Wallbridge , Carrol Plummer , Andrew W. Eckford

The possibility to guide and control magnetic nanoparticles in a non-invasive manner has spawned various applications in biotechnology such as targeted drug delivery and sensing of biological substances. These applications are facilitated…

Emerging Technologies · Computer Science 2019-02-05 Wayan Wicke , Arman Ahmadzadeh , Vahid Jamali , Harald Unterweger , Christoph Alexiou , Robert Schober

In this work, we describe the first modular, and programmable platform capable of transmitting a text message using chemical signalling -- a method also known as molecular communication. This form of communication is attractive for…

Emerging Technologies · Computer Science 2014-03-05 Nariman Farsad , Weisi Guo , Andrew W. Eckford

Currently, molecular tunnel junctions are recognized as important active elements of various nanodevices. This gives a strong motivation to study physical mechanisms controlling electron transport through molecules. Electron motion through…

Mesoscale and Nanoscale Physics · Physics 2013-01-24 Natalya A. Zimbovskaya

Proteins' fuzziness are features for communicating changes in cell signaling instigated by binding with secondary messengers, such as calcium ions, associated with the coordination of muscle contraction, neurotransmitter release, and gene…

Quantitative Methods · Quantitative Biology 2024-07-25 Pengzhi Zhang , Jules Nde , Yossi Eliaz , Nathaniel Jennings , Piotr Cieplak , Margaret. S. Cheung

We have used molecular simulation and methods of importance sampling to study the thermodynamics and kinetics of ionic charge separation at a liquid water-metal interface. We have considered this process using canonical examples of two…

Chemical Physics · Physics 2022-06-08 John A. Kattirtzi , David T. Limmer , Adam P. Willard

The world of nanoscales in fluidics is the frontier where the continuum of fluid mechanics meets the atomic, and even quantum, nature of matter. While water dynamics remains largely classical under extreme confinement, several experiments…

Mesoscale and Nanoscale Physics · Physics 2025-01-03 Baptiste Coquinot , Anna T. Bui , Damien Toquer , Angelos Michaelides , Nikita Kavokine , Stephen J. Cox , Lydéric Bocquet

Mechanoelectrical transduction in the inner ear is a biophysical process underlying the senses of hearing and balance. The key players involved in this process are mechanosensitive ion channels. They are located in the stereocilia of hair…

Subcellular Processes · Quantitative Biology 2017-12-25 Francesco Gianoli , Thomas Risler , Andrei S. Kozlov

We develop a simulation method which allows us to calculate the critical micelle concentrations for ionic surfactants in the presence of different salts. The results are in good agreement with the experimental data. The simulations are…

Chemical Physics · Physics 2014-04-15 Alexandre P. dos Santos , Wagner Figueiredo , Yan Levin

A hitherto unexploited characteristic feature of emerging iontronic devices for information processing is the intrinsic mobility of the medium (water) of dissolved ions in aqueous electrolytes, which therefore not only respond to voltage…

Soft Condensed Matter · Physics 2024-04-24 A. Barnaveli , T. M. Kamsma , W. Q. Boon , R. van Roij

Carbon nanomembranes (CNMs) are nanometer-thin disordered carbon materials that are suitable for a range of applications, from energy generation and storage, through to water filtration. The structure-property relationships of these…