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Sparse training is a natural idea to accelerate the training speed of deep neural networks and save the memory usage, especially since large modern neural networks are significantly over-parameterized. However, most of the existing methods…

Machine Learning · Computer Science 2021-11-11 Xiao Zhou , Weizhong Zhang , Zonghao Chen , Shizhe Diao , Tong Zhang

Sparse coding is a core building block in many data analysis and machine learning pipelines. Typically it is solved by relying on generic optimization techniques, such as the Iterative Soft Thresholding Algorithm and its accelerated version…

Machine Learning · Statistics 2017-06-06 Thomas Moreau , Joan Bruna

We study parameter estimation in Nonlinear Factor Analysis (NFA) where the generative model is parameterized by a deep neural network. Recent work has focused on learning such models using inference (or recognition) networks; we identify a…

Machine Learning · Statistics 2017-10-18 Rahul G. Krishnan , Dawen Liang , Matthew Hoffman

Graph neural networks (GNNs) are commonly used in semi-supervised settings. Previous research has primarily focused on finding appropriate graph filters (e.g. aggregation methods) to perform well on both homophilic and heterophilic graphs.…

Machine Learning · Computer Science 2025-01-17 Yoonhyuk Choi , Jiho Choi , Taewook Ko , Chong-Kwon Kim

In this paper, we present algorithms and implementations for the end-to-end GPU acceleration of matrix-free low-order-refined preconditioning of high-order finite element problems. The methods described here allow for the construction of…

Mathematical Software · Computer Science 2023-06-05 Will Pazner , Tzanio Kolev , Jean-Sylvain Camier

Artificial intelligence workloads, especially transformer models, exhibit emergent sparsity in which computations perform selective sparse access to dense data. The workloads are inefficient on hardware designed for dense computations and…

Data Structures and Algorithms · Computer Science 2024-02-23 Brian Wheatman , Meghana Madhyastha , Randal Burns

In this work, we study a variant of nonnegative matrix factorization where we wish to find a symmetric factorization of a given input matrix into a sparse, Boolean matrix. Formally speaking, given $\mathbf{M}\in\mathbb{Z}^{m\times m}$, we…

Machine Learning · Computer Science 2022-01-14 Sitan Chen , Zhao Song , Runzhou Tao , Ruizhe Zhang

Sketching-based preconditioners have been shown to accelerate the solution of dense least-squares problems with coefficient matrices having substantially more rows than columns. The cost of generating these preconditioners can be reduced by…

Numerical Analysis · Mathematics 2025-06-12 Erin Carson , Ieva Daužickaitė

Nonnegative matrix factorization (NMF) is a powerful technique for dimension reduction, extracting latent factors and learning part-based representation. For large datasets, NMF performance depends on some major issues: fast algorithms,…

Optimization and Control · Mathematics 2015-07-01 Duy-Khuong Nguyen , Tu-Bao Ho

The nonnegative matrix factorization (NMF) is widely used in signal and image processing, including bio-informatics, blind source separation and hyperspectral image analysis in remote sensing. A great challenge arises when dealing with a…

Computer Vision and Pattern Recognition · Computer Science 2016-03-29 Fei Zhu , Paul Honeine , Maya Kallas

Solving the normal equations corresponding to large sparse linear least-squares problems is an important and challenging problem. For very large problems, an iterative solver is needed and, in general, a preconditioner is required to…

Numerical Analysis · Mathematics 2022-01-04 Hussam Al Daas , Pierre Jolivet , Jennifer Scott

Nonnegative matrix factorization (NMF) has an established reputation as a useful data analysis technique in numerous applications. However, its usage in practical situations is undergoing challenges in recent years. The fundamental factor…

Machine Learning · Computer Science 2016-05-04 Mariano Tepper , Guillermo Sapiro

Graph foundation models have demonstrated remarkable adaptability across diverse downstream tasks through large-scale pretraining on graphs. However, existing implementations of the backbone model, graph transformers, are typically limited…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-04-21 Jun-Liang Lin , Kamesh Madduri , Mahmut Taylan Kandemir

Sparse linear systems are typically solved using preconditioned iterative methods, but applying preconditioners via sparse triangular solves introduces bottlenecks due to irregular memory accesses and data dependencies. This work leverages…

Performance · Computer Science 2025-08-08 Atharva Gondhalekar , Kjetil Haugen , Thomas Gibson , Wu-chun Feng

We present a sparse matrix permutation from graph theory that gives stable incomplete Lower-Upper (LU) preconditioners necessary for iterative solutions to the steady state density matrix for quantum optomechanical systems. This reordering…

Quantum Physics · Physics 2015-01-28 P. D. Nation , J. R. Johansson , M. P. Blencowe , A. J. Rimberg

We propose to enhance the training of physics-informed neural networks (PINNs). To this aim, we introduce nonlinear additive and multiplicative preconditioning strategies for the widely used L-BFGS optimizer. The nonlinear preconditioners…

Numerical Analysis · Mathematics 2024-04-16 Alena Kopaničáková , Hardik Kothari , George Em Karniadakis , Rolf Krause

In recent years, artificial neural networks have achieved state-of-the-art performance for predicting the responses of neurons in the visual cortex to natural stimuli. However, they require a time consuming parameter optimization process…

Neurons and Cognition · Quantitative Biology 2020-10-24 R. James Cotton , Fabian H. Sinz , Andreas S. Tolias

Many applications of machine learning require a model to make accurate pre-dictions on test examples that are distributionally different from training ones, while task-specific labels are scarce during training. An effective approach to…

Machine Learning · Computer Science 2020-02-20 Weihua Hu , Bowen Liu , Joseph Gomes , Marinka Zitnik , Percy Liang , Vijay Pande , Jure Leskovec

In this paper, two efficient iterative algorithms based on the simpler GMRES method are proposed for solving shifted linear systems. To make full use of the shifted structure, the proposed algorithms utilizing the deflated restarting…

Numerical Analysis · Mathematics 2021-07-26 Hong-Xiu Zhong , Xian-Ming Gu

A primary computational problem in kernel regression is solution of a dense linear system with the $N\times N$ kernel matrix. Because a direct solution has an O($N^3$) cost, iterative Krylov methods are often used with fast matrix-vector…

Numerical Analysis · Computer Science 2014-08-07 Balaji Vasan Srinivasan , Qi Hu , Nail A. Gumerov , Raghu Murtugudde , Ramani Duraiswami
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