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In the field of algebraic systems biology, the number of minimal polynomial models constructed using discretized data from an underlying system is related to the number of distinct reduced Gr\"obner bases for the ideal of the data points.…

Algebraic Geometry · Mathematics 2024-11-19 Anyu Zhang , Brandilyn Stigler

The algebraic method provides useful techniques to identify models in designs and to understand aliasing of polynomial models. The present note surveys the topic of Gr\"obner bases in experimental design and then describes the notion of…

Methodology · Statistics 2012-07-13 Hugo Maruri-Aguilar , Henry P. Wynn

In the context of modeling biological systems, it is of interest to generate ideals of points with a unique reduced Groebner basis, and the first main goal of this paper is to identify classes of ideals in polynomial rings which share this…

Commutative Algebra · Mathematics 2024-11-19 Elena Dimitrova , Qijun He , Lorenzo Robbiano , Brandilyn Stigler

Statistical latent class models are widely used in social and psychological researches, yet it is often difficult to establish the identifiability of the model parameters. In this paper we consider the identifiability issue of a family of…

Methodology · Statistics 2016-03-15 Gongjun Xu

While hidden class models of various types arise in many statistical applications, it is often difficult to establish the identifiability of their parameters. Focusing on models in which there is some structure of independence of some of…

Statistics Theory · Mathematics 2009-09-01 Elizabeth S. Allman , Catherine Matias , John A. Rhodes

Polynomial filters, a kind of Graph Neural Networks, typically use a predetermined polynomial basis and learn the coefficients from the training data. It has been observed that the effectiveness of the model is highly dependent on the…

Machine Learning · Computer Science 2023-07-04 Yuhe Guo , Zhewei Wei

We prove identifiability of parameters for a broad class of random graph mixture models. These models are characterized by a partition of the set of graph nodes into latent (unobservable) groups. The connectivities between nodes are…

Statistics Theory · Mathematics 2010-06-07 Elizabeth S. Allman , Catherine Matias , John A. Rhodes

Assuming sufficiently many terms of a n-dimensional table defined over a field are given, we aim at guessing the linear recurrence relations with either constant or polynomial coefficients they satisfy. In many applications, the table terms…

Symbolic Computation · Computer Science 2021-11-19 Jérémy Berthomieu , Mohab Safey El Din

With nonignorable missing data, likelihood-based inference should be based on the joint distribution of the study variables and their missingness indicators. These joint models cannot be estimated from the data alone, thus requiring the…

Statistics Theory · Mathematics 2017-01-06 Mauricio Sadinle , Jerome P. Reiter

Higher-order graph neural networks (HOGNNs) and the related architectures from Topological Deep Learning are an important class of GNN models that harness polyadic relations between vertices beyond plain edges. They have been used to…

A strong link between information geometry and algebraic statistics is made by investigating statistical manifolds which are algebraic varieties. In particular it it shown how first and second order efficient estimators can be constructed,…

Statistics Theory · Mathematics 2014-01-13 Kei Kobayashi , Henry P. Wynn

In the context of algebraic statistics an experimental design is described by a set of polynomials called the design ideal. This, in turn, is generated by finite sets of polynomials. Two types of generating sets are mostly used in the…

Methodology · Statistics 2008-09-10 Roberto Notari , Eva Riccomagno , Maria-Piera Rogantin

Interpreting data with mathematical models is an important aspect of real-world industrial and applied mathematical modeling. Often we are interested to understand the extent to which a particular set of data informs and constrains model…

Methodology · Statistics 2025-03-06 Matthew J Simpson , Ruth E Baker

Identifiability of polynomial models is a key requirement for multiple regression. We consider an analogue of the so-called statistical fan, the set of all maximal identifiable hierarchical models, for cases of noisy experimental designs or…

Methodology · Statistics 2020-10-21 Arkadius Kalka , Sonja Kuhnt

Reliable predictions from systems biology models require knowing whether parameters can be estimated from available data, and with what certainty. Identifiability analysis reveals whether parameters are learnable in principle (structural…

Learning the unknown causal parameters of a linear structural causal model is a fundamental task in causal analysis. The task, known as the problem of identification, asks to estimate the parameters of the model from a combination of…

Artificial Intelligence · Computer Science 2024-07-18 Julian Dörfler , Benito van der Zander , Markus Bläser , Maciej Liskiewicz

An algorithm to generate a minimal comprehensive Gr\"obner\, basis of a parametric polynomial system from an arbitrary faithful comprehensive Gr\"obner\, system is presented. A basis of a parametric polynomial ideal is a comprehensive…

Symbolic Computation · Computer Science 2020-03-19 Deepak Kapur , Yiming Yang

For a particular experimental design, there is interest in finding which polynomial models can be identified in the usual regression set up. The algebraic methods based on Groebner bases provide a systematic way of doing this. The algebraic…

Methodology · Statistics 2008-08-25 Yael Berstein , Hugo Maruri-Aguilar , Shmuel Onn , Eva Riccomagno , Henry Wynn

Generalized latent factor analysis not only provides a useful latent embedding approach in statistics and machine learning, but also serves as a widely used tool across various scientific fields, such as psychometrics, econometrics, and…

Methodology · Statistics 2025-08-11 Chengyu Cui , Gongjun Xu

This paper considers the problem of building saturated models for first-order graded logics. We define types as pairs of sets of formulas in one free variable which express properties that an element is expected, respectively, to satisfy…

Logic · Mathematics 2018-10-24 Guillermo Badia , Carles Noguera
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