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In computational biology, $k$-mers and edit distance are fundamental concepts. However, little is known about the metric space of all $k$-mers equipped with the edit distance. In this work, we explore the structure of the $k$-mer space by…

Data Structures and Algorithms · Computer Science 2023-03-21 Leran Ma , Ke Chen , Mingfu Shao

We consider the problem of devising algorithms to count exactly the number of independent sets of a graph G . We show that there is a polynomial time algorithm for this problem when G is restricted to the class of strongly orderable graphs,…

Discrete Mathematics · Computer Science 2021-01-07 Marc Heinrich , Haiko Müller

We present quantum complexity lower and upper bounds for independent set problems in graphs. In particular, we give quantum algorithms for computing a maximal and a maximum independent set in a graph. We present applications of these…

Quantum Physics · Physics 2007-05-23 Sebastian Doern

We study the complexity of approximate counting Constraint Satisfaction Problems (#CSPs) in a bounded degree setting. Specifically, given a Boolean constraint language $\Gamma$ and a degree bound $\Delta$, we study the complexity of…

Data Structures and Algorithms · Computer Science 2020-08-21 Andreas Galanis , Leslie Ann Goldberg , Kuan Yang

Counting integer solutions of linear constraints has found interesting applications in various fields. It is equivalent to the problem of counting lattice points inside a polytope. However, state-of-the-art algorithms for this problem…

Data Structures and Algorithms · Computer Science 2023-12-15 Cunjing Ge

Counting independent sets on bipartite graphs (#BIS) is considered a canonical counting problem of intermediate approximation complexity. It is conjectured that #BIS neither has an FPRAS nor is as hard as #SAT to approximate. We study #BIS…

Computational Complexity · Computer Science 2016-05-30 Jin-Yi Cai , Andreas Galanis , Leslie Ann Goldberg , Heng Guo , Mark Jerrum , Daniel Stefankovic , Eric Vigoda

This paper presents a fast and simple new 2-approximation algorithm for minimum weighted vertex cover. The unweighted version of this algorithm is equivalent to a well-known greedy maximal independent set algorithm. We prove that this…

Data Structures and Algorithms · Computer Science 2022-09-13 Nate Veldt

In this article, we study a generalized version of the maximum independent set and minimum dominating set problems, namely, the maximum $d$-distance independent set problem and the minimum $d$-distance dominating set problem on unit disk…

Data Structures and Algorithms · Computer Science 2020-06-30 Sangram K. Jena , Ramesh K. Jallu , Gautam K. Das , Subhas C. Nandy

We consider a large family of problems in which an ordering (or, more precisely, a chain of subsets) of a finite set must be chosen to minimize some weighted sum of costs. This family includes variations of Min Sum Set Cover (MSSC), several…

Data Structures and Algorithms · Computer Science 2021-06-28 Felix Happach , Lisa Hellerstein , Thomas Lidbetter

We present a Satisfiability (SAT)-based approach for building Mixed Covering Arrays with Constraints of minimum length, referred to as the Covering Array Number problem. This problem is central in Combinatorial Testing for the detection of…

Artificial Intelligence · Computer Science 2021-05-27 Carlos Ansótegui , Felip Manyà , Jesus Ojeda , Josep M. Salvia , Eduard Torres

In the semi-streaming model for processing massive graphs, an algorithm makes multiple passes over the edges of a given $n$-vertex graph and is tasked with computing the solution to a problem using $O(n \cdot \text{polylog}(n))$ space.…

Data Structures and Algorithms · Computer Science 2023-12-21 Sepehr Assadi , Christian Konrad , Kheeran K. Naidu , Janani Sundaresan

Answer Set Programming (ASP) has emerged as a promising paradigm in knowledge representation and automated reasoning owing to its ability to model hard combinatorial problems from diverse domains in a natural way. Building on advances in…

Logic in Computer Science · Computer Science 2023-12-20 Mohimenul Kabir , Supratik Chakraborty , Kuldeep S Meel

Two of the most fundamental distributed symmetry-breaking problems are that of finding a maximal independent set (MIS) and a maximal matching (MM) in a graph. It is a major open question whether these problems can be solved in constant…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-03-03 Keren Censor-Hillel , Tomer Even , Maxime Flin , Magnús M. Halldórsson

We present an approximation algorithm for the maximum independent set (MIS) problem over the class of equilateral $B_1$-VPG graphs. These are intersection graphs of $L$-shaped planar objects % (and their rotations by multiples of $90^o$)…

Data Structures and Algorithms · Computer Science 2019-12-18 Abhiruk Lahiri , Joydeep Mukherjee , C. R. Subramanian

A variant of the well-known Set Covering Problem is studied in this paper, where subsets of a collection have to be selected, and pairwise conflicts among subsets of items exist. The selection of each subset has a cost, and the inclusion of…

Optimization and Control · Mathematics 2025-04-22 Roberto Montemanni , Derek H. Smith

The maximum segment sum problem is to compute, given a list of integers, the largest of the sums of the contiguous segments of that list. This problem specification maps directly onto a cubic-time algorithm; however, there is a very elegant…

Data Structures and Algorithms · Computer Science 2011-11-21 Jeremy Gibbons

We show that the number of independent sets in cocomparability graphs can be counted in linear time, as can counting cliques in comparability graphs. By contrast, counting cliques in cocomparabilty graphs and counting independent sets in…

Discrete Mathematics · Computer Science 2018-08-30 Martin Dyer , Haiko Müller

This note confirms a conjecture of [Bramoull\'{e}, Anti-coordination and social interactions, Games and Economic Behavior, 58, 2007: 30-49]. The problem, which we name the maximum independent cut problem, is a restricted version of the…

Computer Science and Game Theory · Computer Science 2012-04-03 Zhigang Cao , Xiaoguang Yang

Constraint satisfaction problems (CSPs) consist of a set of variables taking values from some finite domain and a set of local constraints on these variables. The objective is to find an assignment to the variables that maximizes the…

Computational Complexity · Computer Science 2026-05-12 Amey Bhangale , Yezhou Zhang

The purpose of this article is to examine and limit the conditions in which the P complexity class could be equivalent to the NP complexity class. Proof is provided by demonstrating that as the number of clauses in a NP-complete problem…

Computational Complexity · Computer Science 2008-09-07 Jerrald Meek
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