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We modify the standard Vicsek model to clearly distinguish between intrinsic noise due to imperfect alignment between organisms, and extrinsic noise due to fluid motion. We then consider the effect of a steady vortical flow, the Taylor…

Biological Physics · Physics 2015-06-11 Andrew W. Baggaley

The presence of one or more species at some spatial locations but not others is a central matter in ecology. This phenomenon is related to ecological pattern formation. Nonlocal interactions can be considered as one of the mechanisms…

Populations and Evolution · Quantitative Biology 2017-12-29 Ozgur Aydogmus

Unstable shear layers in environmental and industrial flows roll up into a series of vortices, which often form complex nonlinear merging patterns like pairs and triplets. These patterns crucially determine the subsequent turbulence, mixing…

Fluid Dynamics · Physics 2019-10-23 Anirban Guha , Mona Rahmani

Complex mixing and magnetic field generation occurs within stellar interiors particularly where there is a strong shear flow. To obtain a comprehensive understanding of these processes, it is necessary to study the complex dynamics of shear…

Solar and Stellar Astrophysics · Physics 2018-10-17 V. Witzke , L. J. Silvers , B. Favier

We consider a two-dimensional model of three species in rock-paper-scissors competition and study the self-organisation of the population into fascinating spiraling patterns. Within our individual-based metapopulation formulation, the…

Populations and Evolution · Quantitative Biology 2016-09-13 Mauro Mobilia , Alastair M. Rucklidge , Bartosz Szczesny

Local phonon motion underneath a surface interacting with a flow may cause the flow to passively stabilize, or destabilize, as desired within the region adjacent to the subsurface motion. This mechanism has been extensively analyzed over…

Fluid Dynamics · Physics 2023-12-19 Armin Kianfar , Mahmoud I. Hussein

A discrete-time model of reacting evolving fields, transported by a bidimensional chaotic fluid flow, is studied. Our approach is based on the use of a Lagrangian scheme where {\it fluid particles} are advected by a $2d$ symplectic map…

Biological populations are subject to two types of noise: demographic stochasticity due to fluctuations in the reproductive success of individuals, and environmental variations that affect coherently the relative fitness of entire…

Populations and Evolution · Quantitative Biology 2018-04-04 Matan Danino , David A. Kessler , Nadav M. Shnerb

How producers of public goods persist in microbial communities is a major question in evolutionary biology. Cooperation is evolutionarily unstable, since cheating strains can reproduce quicker and take over. Spatial structure has been shown…

Populations and Evolution · Quantitative Biology 2018-05-28 Gurdip Uppal , Dervis Can Vural

We derive an equation that governs the spatiotemporal dynamics of small amplitude alternans in paced cardiac tissue. We show that a pattern-forming linear instability leads to the spontaneous formation of stationary or traveling waves whose…

Statistical Mechanics · Physics 2009-11-07 Blas Echebarria , Alain Karma

The growth and evolution of microbial populations is often subjected to advection by fluid flows in spatially extended environments, with immediate consequences for questions of spatial population genetics in marine ecology, planktonic…

Populations and Evolution · Quantitative Biology 2022-08-26 Roberto Benzi , David R. Nelson , Suraj Shankar , Federico Toschi , Xiaojue Zhu

Environment plays a fundamental role in the competition for resources, and hence in the evolution of populations. Here, we study a well-mixed, finite population consisting of two strains competing for the limited resources provided by an…

Populations and Evolution · Quantitative Biology 2017-10-16 Karl Wienand , Erwin Frey , Mauro Mobilia

Spatially extended population dynamics models that incorporate intrinsic noise serve as case studies for the role of fluctuations and correlations in biological systems. Including spatial structure and stochastic noise in predator-prey…

Statistical Mechanics · Physics 2018-01-09 Ulrich Dobramysl , Mauro Mobilia , Michel Pleimling , Uwe C. Täuber

We consider a model for population dynamics such as for the evolution of bacterial colonies which is of the Fisher type but where the competitive interaction among individuals is non-local, and show that spatial structures with interesting…

Pattern Formation and Solitons · Physics 2016-09-08 M. A. Fuentes , M. N. Kuperman , V. M. Kenkre

We investigate a nonlocal generalization of the Fisher-KPP equation, which incorporates logistic growth and diffusion, for a single species population in a viable patch (refuge). In this framework, diffusion plays an homogenizing role,…

Populations and Evolution · Quantitative Biology 2025-01-22 G. G. Piva , C. Anteneodo

Understanding the relationship between population and the built environment is essential for addresing socio-spatial inequalities. While researchers have long theorized these dynamics, empirical analyses remain limited. This study develops…

Computers and Society · Computer Science 2026-03-12 Anna Brazdova , Martin Fleischmann

Microbial populations in the natural environment are likely to experience growth conditions very different from those of a typical laboratory xperiment. In particular, removal rates of biomass and substrate are unlikely to be balanced under…

Populations and Evolution · Quantitative Biology 2015-05-18 Bhavin S. Khatri , Andrew Free , Rosalind J. Allen

We use direct numerical simulation to study the temporal evolution of a perturbation localized on the turbulent layer that typically separates a cloud from the surrounding clear air. Across this shearless layer, a turbulent kinetic energy…

We propose a new non-equilibrium model for spatial pattern formation on the basis of local information transfer. Unlike standard models of pattern formation it is not based on the Turing instability. Information is transmitted through the…

Statistical Mechanics · Physics 2007-05-23 Thimo Rohlf , Stefan Bornholdt

The effect of external fluctuations on the formation of spatial patterns is analysed by means of a stochastic Swift-Hohenberg model with multiplicative space-correlated noise. Numerical simulations in two dimensions show a shift of the…

Condensed Matter · Physics 2009-10-28 J. Garcia-Ojalvo , J. M. Sancho