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We investigate fully self-consistent multiscale quantum-classical algorithms on current generation superconducting quantum computers, in a unified approach to tackle the correlated electronic structure of large systems in both quantum…

Identifying similar protein sequences is a core step in many computational biology pipelines such as detection of homologous protein sequences, generation of similarity protein graphs for downstream analysis, functional annotation and gene…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-10-01 Oguz Selvitopi , Saliya Ekanayake , Giulia Guidi , Georgios Pavlopoulos , Ariful Azad , Aydin Buluc

This work introduces a kernel-independent, multilevel, adaptive algorithm for efficiently evaluating a discrete convolution kernel with a given source distribution. The method is based on linear algebraic tools such as low rank…

Numerical Analysis · Mathematics 2025-07-11 Anna Yesypenko , Chao Chen , Per-Gunnar Martinsson

Deep-learning accelerators are increasingly in demand; however, their performance is constrained by the size of the feature map, leading to high bandwidth requirements and large buffer sizes. We propose an adaptive scale feature map…

Computer Vision and Pattern Recognition · Computer Science 2025-03-25 Yuan Yao , Tian-Sheuan Chang

We have a set of processors (or agents) and a set of graph networks defined over some vertex set. Each processor can access a subset of the graph networks. Each processor has a demand specified as a pair of vertices $<u, v>$, along with a…

Data Structures and Algorithms · Computer Science 2012-10-08 Venkatesan T. Chakaravarthy , Sambuddha Roy , Yogish Sabharwal

In this paper, we consider the problem of sparse signal detection based on partial support set estimation with compressive measurements in a distributed network. Multiple nodes in the network are assumed to observe sparse signals which…

Applications · Statistics 2016-08-10 Thakshila Wimalajeewa , Pramod K. Varshney

We propose a kernel compression method for solving Distributed-Order (DO) Fractional Partial Differential Equations (DOFPDEs) at the cost of solving corresponding local-in-time PDEs. The key concepts are (1) discretization of the integral…

Numerical Analysis · Mathematics 2025-08-20 Jonas Beddrich , Barbara Wohlmuth

We develop and extensively evaluate highly scalable distributed-memory algorithms for computing minimum spanning trees (MSTs). At the heart of our solutions is a scalable variant of Boruvka's algorithm. For partitioned graphs with many…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-12-11 Peter Sanders , Matthias Schimek

Sparse matrix-vector multiplication (SpMV) is a central building block for scientific software and graph applications. Recently, heterogeneous processors composed of different types of cores attracted much attention because of their…

Mathematical Software · Computer Science 2015-09-15 Weifeng Liu , Brian Vinter

We describe an efficient parallel implementation of the selected inversion algorithm for distributed memory computer systems, which we call \texttt{PSelInv}. The \texttt{PSelInv} method computes selected elements of a general sparse matrix…

Numerical Analysis · Mathematics 2015-06-01 Mathias Jacquelin , Lin Lin , Chao Yang

We propose Slim Graph: the first programming model and framework for practical lossy graph compression that facilitates high-performance approximate graph processing, storage, and analytics. Slim Graph enables the developer to express…

Data Structures and Algorithms · Computer Science 2021-08-04 Maciej Besta , Simon Weber , Lukas Gianinazzi , Robert Gerstenberger , Andrey Ivanov , Yishai Oltchik , Torsten Hoefler

The Morse-Smale complex is an important tool for global topological analysis in various problems of computational geometry and topology. Algorithms for Morse-Smale complexes have been presented in case of piecewise linear manifolds.…

Computational Geometry · Computer Science 2015-06-23 Amit Chattopadhyay , Gert Vegter , Chee K. Yap

We initiate the study of graph algorithms in the streaming setting on massive distributed and parallel systems inspired by practical data processing systems. The objective is to design algorithms that can efficiently process evolving graphs…

Data Structures and Algorithms · Computer Science 2025-01-20 Artur Czumaj , Gopinath Mishra , Anish Mukherjee

The increasing demand for larger and higher fidelity simulations has made Adaptive Mesh Refinement (AMR) and unstructured mesh techniques essential to focus compute effort and memory cost on just the areas of interest in the simulation…

Graphics · Computer Science 2025-01-23 Xuan Huang , Will Usher , Valerio Pascucci

Distance metric learning is successful in discovering intrinsic relations in data. However, most algorithms are computationally demanding when the problem size becomes large. In this paper, we propose a discriminative metric learning…

Machine Learning · Computer Science 2019-05-15 Jun Li , Xun Lin , Xiaoguang Rui , Yong Rui , Dacheng Tao

We consider the problem of coded distributed computing where a large linear computational job, such as a matrix multiplication, is divided into $k$ smaller tasks, encoded using an $(n,k)$ linear code, and performed over $n$ distributed…

Information Theory · Computer Science 2019-06-25 Mohammad Vahid Jamali , Mahdi Soleymani , Hessam Mahdavifar

Model order reduction has been extensively studied over the last two decades. Projection-based methods such as the Proper Orthogonal Decomposition and the Reduced Basis Method enjoy the important advantages of Galerkin methods in the…

Numerical Analysis · Mathematics 2021-08-30 Thomas Daniel , Fabien Casenave , Nissrine Akkari , David Ryckelynck

This paper presents adaptive link selection algorithms for distributed estimation and considers their application to wireless sensor networks and smart grids. In particular, exhaustive search--based least--mean--squares(LMS)/recursive least…

Systems and Control · Computer Science 2015-10-20 S. Xu , R. C. de Lamare , H. V. Poor

We present a parallel implementation of a direct solver for the Poisson's equation on extreme-scale supercomputers with accelerators. We introduce a chunked-pencil decomposition as the domain-decomposition strategy to distribute work among…

Computational Physics · Physics 2020-07-15 Jaber J. Hasbestan , Inanc Senocak

Many problems of interest for cyber-physical network systems can be formulated as Mixed-Integer Linear Programs in which the constraints are distributed among the agents. In this paper we propose a distributed algorithmic framework to solve…

Optimization and Control · Mathematics 2019-06-05 Andrea Testa , Alessandro Rucco , Giuseppe Notarstefano
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