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The commonly observed negative correlation between the number of species in an ecological community and disease risk, typically referred to as "the dilution effect", has received a substantial amount of attention over the past decade.…

Populations and Evolution · Quantitative Biology 2020-01-22 Peter Shaffery , Bret D. Elderd , Vanja Dukic

Accurate biodiversity monitoring is essential for effective environmental policy, yet current practices often rely on arbitrarily defined ecosystems, communities, and ad-hoc indicator species, limiting cost-efficiency and reproducibility.…

Applications · Statistics 2025-12-02 Braden Scherting , Otso Ovaskainen , Tomas Roslin , David B. Dunson

Consider the Erd\H{o}s-Renyi random graph on n vertices where each edge is present independently with probability c/n, with c>0 fixed. For large n, a typical random graph locally behaves like a Galton-Watson tree with Poisson offspring…

Probability · Mathematics 2016-04-08 Charles Bordenave , Pietro Caputo

Spatio-temporal pathogen spread is often partially observed at the metapopulation scale. Available data correspond to proxies and are incomplete, censored and heterogeneous. Moreover, representing such biological systems often leads to…

Populations and Evolution · Quantitative Biology 2023-12-04 Gaël Beaunée , Pauline Ezanno , Alain Joly , Pierre Nicolas , Elisabeta Vergu

In recent years, biodiversity measures have gained prominence as essential tools for ecological and environmental assessments, particularly in the context of increasingly complex and large-scale datasets. We provide a comprehensive review…

Populations and Evolution · Quantitative Biology 2024-12-06 Shinto Eguchi

Estimating population-level prevalence and transmission dynamics of wildlife pathogens can be challenging, partly because surveillance data is sparse, detection-driven, and unevenly sequenced. Using highly pathogenic avian influenza A/H5…

Populations and Evolution · Quantitative Biology 2026-01-16 Haley Stone , Jing Du , Yang Yang , Ashna Desai , Rebecca Dawson , Hao Xue , David Heslop , Matthew Scotch , Andreas Züfle , C. Raina MacIntyre , Flora Salim

The Boltzmann-Shannon Index (BSI) for clustered continuous data is introduced as a normalized measure that captures the relationship between geometry-based and frequency-based probability distributions defined over the clusters. In essence,…

Information Theory · Computer Science 2025-12-18 Emanuele Bossi , C. Tyler Diggans , Abd AlRahman R. AlMomani

The Gini index is a number that attempts to measure how equitably a resource is distributed throughout a population, and is commonly used in economics as a measurement of inequality of wealth or income. The Gini index is often defined as…

Combinatorics · Mathematics 2022-02-01 Grant Kopitzke

We prove a collection of asymptotic density results for several interesting classes of the $I$-graphs. Specifically, we quantify precisely the proportion of $I$-graphs that are generalised Petersen graphs as well as those that are…

Combinatorics · Mathematics 2024-12-30 Harrison Bohl , Adrian W. Dudek

Compartmental epidemic models with dynamics that evolve over a graph network have gained considerable importance in recent years but analysis of these models is in general difficult due to their complexity. In this paper, we develop two…

Populations and Evolution · Quantitative Biology 2023-05-31 Sei Zhen Khong , Lanlan Su

In the modeling of parasite transmission dynamics, understanding the reproductive characteristics of these parasites is crucial. This paper presents a mathematical model that explores the reproductive behavior of dioecious parasites and its…

Populations and Evolution · Quantitative Biology 2023-05-30 Gonzalo Maximiliano Lopez , Juan Pablo Aparicio

This paper proposes a geometric estimator of dependency between a pair of multivariate samples. The proposed estimator of dependency is based on a randomly permuted geometric graph (the minimal spanning tree) over the two multivariate…

Machine Learning · Computer Science 2019-10-02 Salimeh Yasaei Sekeh , Alfred O. Hero

A theory of relative species abundance on sparsely-connected networks is presented by investigating the replicator dynamics with symmetric interactions. Sparseness of a network involves difficulty in analyzing the fixed points of the…

Statistical Mechanics · Physics 2016-12-21 Tomoyuki Obuchi , Yoshiyuki Kabashima , Kei Tokita

A pair of variables that tend to rise and fall either together or in opposition are said to be monotonically associated. For certain phenomena, this tendency is causally restricted to a subpopulation, as, for example, an allergic reaction…

Applications · Statistics 2015-09-03 Srinath Sampath , Adriano Caloiaro , Wayne Johnson , Joseph S. Verducci

We build a general framework which establishes a one-to-one correspondence between species abundance distribution (SAD) and species accumulation curve (SAC). The appearance rates of the species and the appearance times of individuals of…

Applications · Statistics 2022-10-25 Cheuk Ting Li , Kim-Hung Li

We introduce a new quantity known as the network heterogeneity index, denoted by $\mathcal{H}$, which facilitates the investigation of disease propagation and population persistence in heterogeneous environments. Our mathematical analysis…

Populations and Evolution · Quantitative Biology 2024-10-15 Poroshat Yazdanbakhsh , Mark Anderson , Zhisheng Shuai

Non-Gaussian outcomes are often modeled using members of the so-called exponential family. Notorious members are the Bernoulli model for binary data, leading to logistic regression, and the Poisson model for count data, leading to Poisson…

Diffusion in the crowded environments of the biological membranes or materials interfaces often involves intermittent binding to surface proteins or defects. To account for this situation we study a 2-dimensional lattice gas in a field of…

Soft Condensed Matter · Physics 2021-06-25 Mislav Cvitković , Dipanwita Ghanti , Niklas Raake , Ana-Sunčana Smith

This paper proposes new estimators for the propensity score that aim to maximize the covariate distribution balance among different treatment groups. Heuristically, our proposed procedure attempts to estimate a propensity score model by…

Econometrics · Economics 2020-04-07 Pedro H. C. Sant'Anna , Xiaojun Song , Qi Xu

We present a new modeling technique for solving the problem of ecological inference, in which individual-level associations are inferred from labeled data available only at the aggregate level. We model aggregate count data as arising from…

Machine Learning · Statistics 2018-02-06 Evan Rosenman , Nitin Viswanathan