Related papers: Towards a Scalable and Efficient PGAS-based Distri…
We discuss the computational bottlenecks in molecular dynamics (MD) and describe the challenges in parallelizing the computation intensive tasks. We present a hybrid algorithm using MPI (Message Passing Interface) with OpenMP threads for…
Irregular memory access patterns pose performance and user productivity challenges on distributed-memory systems. They can lead to fine-grained remote communication and the data access patterns are often not known until runtime. The…
Heterogeneity has become a mainstream architecture design choice for building High Performance Computing systems. However, heterogeneity poses significant challenges for achieving performance portability of execution. Adapting a program to…
Asynchronous Many-task (AMT) runtime systems have gained increasing acceptance in the HPC community due to the performance improvements offered by fine-grained tasking runtime systems. At the same time, C++ standardization efforts are…
In this paper, we introduce a new user-level DSM system which has the ability to directly interact with underlying interconnection networks. The DSM system provides the application programmer a flexible API to program parallel applications…
As we have entered Exascale computing, the faults in high-performance systems are expected to increase considerably. To compensate for a higher failure rate, the standard checkpoint/restart technique would need to create checkpoints at a…
Over the last decade, most of the increase in computing power has been gained by advances in accelerated many-core architectures, mainly in the form of GPGPUs. While accelerators achieve phenomenal performances in various computing tasks,…
There is an ever-present need for shared memory parallelization schemes to exploit the full potential of multi-core architectures. The most common parallelization API addressing this need today is OpenMP. Nevertheless, writing parallel code…
Upcoming HPC clusters will feature hybrid memories and storage devices per compute node. In this work, we propose to use the MPI one-sided communication model and MPI windows as unique interface for programming memory and storage. We…
By providing highly efficient one-sided communication with globally shared memory space, Partitioned Global Address Space (PGAS) has become one of the most promising parallel computing models in high-performance computing (HPC). Meanwhile,…
Achieving efficient task parallelism on many-core architectures is an important challenge. The widely used GNU OpenMP implementation of the popular OpenMP parallel programming model incurs high overhead for fine-grained, short-running tasks…
MDMP is a new parallel programming approach that aims to provide users with an easy way to add parallelism to programs, optimise the message passing costs of traditional scientific simulation algorithms, and enable existing MPI-based…
Large language models (LLMs) have been widely deployed for online generative services, where numerous LLM instances jointly handle workloads with fluctuating request arrival rates and variable request lengths. To efficiently execute…
Python has become a dominant programming language for emerging areas like Machine Learning (ML), Deep Learning (DL), and Data Science (DS). An attractive feature of Python is that it provides easy-to-use programming interface while allowing…
Performance modeling of parallel applications on multicore computers remains a challenge in computational co-design due to the complex design of multicore processors including private and shared memory hierarchies. We present a Scalable…
Developing an efficient code for large, multiscale astrophysical simulations is crucial in preparing the upcoming era of exascale computing. RAMSES is an astrophysical simulation code that employs parallel processing based on the Message…
This system paper documents the technical foundations for the extension of the Topology ToolKit (TTK) to distributed-memory parallelism with the Message Passing Interface (MPI). While several recent papers introduced topology-based…
Message Passing Interface (MPI) plays a crucial role in distributed memory parallelization across multiple nodes. However, parallelizing MPI code manually, and specifically, performing domain decomposition, is a challenging, error-prone…
The bulk synchronous parallel (BSP) model struggles with irregular workloads due to rigid global communication. While fine-grained asynchronous BSP (FA-BSP) improves overlap, existing implementations typically rely on a limiting…
A new method for the simulation of evolving multi-domains problems has been introduced in a previous work (RealIMotion), Florez et al. (2020). In this article further developments of the model will be presented. The main focus here is a…