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Progress in the creation of large scale, artificial quantum coherent structures demands the investigation of their nonequilibrium dynamics when strong interactions, even between remote parts, are non-perturbative. Analysis of multiparticle…

Bifurcations of dynamical systems, described by a second order differential equations and by an impact condition are studied. It is shown that the variation of parameters when the number of impacts of a periodic solution increases, leads to…

Dynamical Systems · Mathematics 2011-06-23 Sergey Kryzhevich

Many cellular components are present in such low numbers that individual stochastic production and degradation events lead to significant fluctuations in molecular abundances. Although feedback control can, in principle, suppress such…

Molecular Networks · Quantitative Biology 2025-12-25 Ryan Ripsman , Brayden Kell , Andreas Hilfinger

To explain the stability of cooperation is a central task of evolutionary theory. We investigate this question in the case of quorum sensing (QS) bacteria, which regulate cooperative traits in response to population density. Cooperation is…

Populations and Evolution · Quantitative Biology 2019-05-02 Burkhard A. Hense , Matthew McIntosh , Johannes Müller , Martin Schuster

We study the Bazykin predator-prey model with predator intraspecific interactions and ratio-dependent functional response and show the existence and stability of two interior equilibrium points. We prove that the model displays a wide range…

Dynamical Systems · Mathematics 2021-03-08 Claudio Arancibia-Ibarra , Pablo Aguirre , José Flores , Peter van Heijster

The present paper points out to a novel scenario for formation of chaotic attractors in a class of models of excitable cell membranes near an Andronov-Hopf bifurcation (AHB). The mechanism underlying chaotic dynamics admits a simple and…

Chaotic Dynamics · Physics 2009-11-13 Georgi S. Medvedev , Yun Yoo

A model equation has been proposed to describe bimodal features in vehicular traffic flows. The dynamics of the bimodal distribution reveals the existence of a fixed point that is connected to itself by a homoclinic trajectory. The…

Physics and Society · Physics 2014-04-15 Arjun Mullick , Arnab K. Ray

We present a modelling framework for the dynamics of cells structured by the concentration of a micromolecule they contain. We derive general equations for the evolution of the cell population and of the extra-cellular concentration of the…

Cell Behavior · Quantitative Biology 2024-10-30 Michael Grinfeld , Nigel Mottram , Jozsef Farkas

We investigate the emergence of complex dynamics in a system of coupled dissipative kicked rotors and show that critical transitions can be understood via bifurcations of simple states. We study multistability and bifurcations in the single…

Chaotic Dynamics · Physics 2025-10-27 Jin Yan

We discuss three different aspects of the quantum dynamics of bio-molecular systems and more generally complex networks in the presence of strongly coupled environments. Firstly, we make a case for the systematic study of fundamental…

Quantum Physics · Physics 2012-02-07 M. B. Plenio , S. F. Huelga

When bacteria are grown on a mixture of two growth-limiting substrates, they exhibit a rich spectrum of substrate consumption patterns including diauxic growth, simultaneous consumption, and bistable growth. In previous work, we showed that…

Molecular Networks · Quantitative Biology 2007-05-23 Atul Narang , Sergei S. Pilyugin

Hematopoiesis is a complex biological process that leads to the production and regulation of blood cells. It is based upon differentiation of stem cells under the action of growth factors. A mathematical approach of this process is proposed…

Classical Analysis and ODEs · Mathematics 2009-04-17 Mostafa Adimy , Fabien Crauste , Shigui Ruan

Early olfactory pathway responses to the presentation of an odor exhibit remarkably similar dynamical behavior across phyla from insects to mammals, and frequently involve transitions among quiescence, collective network oscillations, and…

Neurons and Cognition · Quantitative Biology 2020-09-29 Pamela B Pyzza , Katherine A Newhall , Douglas Zhou , Gregor Kovacic , David Cai

Many biological, physical, and social interactions have a particular dependence on where they take place. In living cells, protein movement between the nucleus and cytoplasm affects cellular response (i.e., proteins must be present in the…

Molecular Networks · Quantitative Biology 2012-10-11 Heather A. Harrington , Elisenda Feliu , Carsten Wiuf , Michael M. P. Stumpf

The dynamics of a model, originally proposed for a type of instability in plastic flow, has been investigated in detail. The bifurcation portrait of the system in two physically relevant parameters exhibits a rich variety of dynamical…

Chaotic Dynamics · Physics 2009-10-31 S. Rajesh , G. Ananthakrishna

We investigate the transport properties of open quantum chaotic systems in the semiclassical limit. We show how the transmission spectrum, the conductance fluctuations, and their correlations are influenced by the underlying chaotic…

Mesoscale and Nanoscale Physics · Physics 2009-11-10 Ph. Jacquod , E. V. Sukhorukov

The effect of signal integration through cis-regulatory modules (CRMs) on synchronization and clustering of populations of two-component genetic oscillators coupled by quorum sensing is in detail investigated. We find that the CRMs play an…

Molecular Networks · Quantitative Biology 2009-04-06 Jiajun Zhang , Zhanjiang Yuan , Tianshou Zhou

Strongly opinionated minorities can have a dramatic impact on the opinion dynamics of a large population. Two factions of inflexible minorities, polarised into two competing opinions, could lead the entire population to persistent…

Biological Physics · Physics 2023-07-26 Andreagiovanni Reina , Raina Zakir , Giulia De Masi , Eliseo Ferrante

The behavior at bifurcation from global synchronization to partial synchronization in finite networks of coupled oscillators is a complex phenomenon, involving the intricate dynamics of one or more oscillators with the remaining…

Adaptation and Self-Organizing Systems · Physics 2021-07-09 Lauren D Smith , Georg A Gottwald

Bacteria commonly live in structured communities that affect human health and influence ecological systems. Heterogeneous populations, such as motile and non-motile populations, often coexist in bacteria communities. Motile subpopulations…

Biological Physics · Physics 2019-06-19 Haoran Xu , Justas Dauparas , Debasish Das , Eric Lauga , Yilin Wu
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