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Topological data analysis (TDA) is an emerging technique for biological signal processing. TDA leverages the invariant topological features of signals in a metric space for robust analysis of signals even in the presence of noise. In this…

Algebraic Topology · Mathematics 2024-01-11 Shashank Manjunath , Jose A. Perea , Aarti Sathyanarayana

Electroencephalography (EEG) during sleep is used by clinicians to evaluate various neurological disorders. In sleep medicine, it is relevant to detect macro-events (> 10s) such as sleep stages, and micro-events (<2s) such as spindles and…

Signal Processing · Electrical Eng. & Systems 2018-07-17 Stanislas Chambon , Valentin Thorey , Pierrick J. Arnal , Emmanuel Mignot , Alexandre Gramfort

Epilepsy is a well-known neuronal disorder that can be identified by interpretation of the electroencephalogram (EEG) signal. Usually, the length of an EEG signal is quite long which is challenging to interpret manually. In this work, we…

Machine Learning · Computer Science 2019-03-07 Md Mursalin , Syed Shamsul Islam , Md Kislu Noman , Adel Ali Al-Jumaily

Sleep stage classification is crucial for detecting patients' health conditions. Existing models, which mainly use Convolutional Neural Networks (CNN) for modelling Euclidean data and Graph Convolution Networks (GNN) for modelling…

Machine Learning · Computer Science 2023-09-06 Yuze Liu , Ziming Zhao , Tiehua Zhang , Kang Wang , Xin Chen , Xiaowei Huang , Jun Yin , Zhishu Shen

Background: Topological data analysis (TDA) has exploded as a tool for analyzing and making sense of high dimensional datasets across a variety of fields. Mapper is a tool from TDA that captures low-dimensional structure from…

General Topology · Mathematics 2025-12-04 Brittany Story , Zhibin Zhou , Ramesh Srinivasan , Scott Kerick , David Boothe , Piotr J. Franaszczuk

Automated sleep stage classification from polysomnography remains limited by the lack of expressive temporal hierarchies, challenges in multimodal EEG and EOG fusion, and the limited interpretability of deep learning models. We propose…

Machine Learning · Computer Science 2025-11-14 Mahdi Samaee , Mehran Yazdi , Daniel Massicotte

While generative models have shown promise in pediatric sleep analysis, the latent structure of their multimodal embeddings remains poorly understood. This work investigates session-wide diagnostic information contained in the sequences of…

Machine Learning · Computer Science 2026-05-15 Scott Ye , Harlin Lee

Recently there has seen promising results on automatic stage scoring by extracting spatio-temporal features from electroencephalogram (EEG). Such methods entail laborious manual feature engineering and domain knowledge. In this study, we…

Signal Processing · Electrical Eng. & Systems 2022-04-08 Lingwei Zhu , Koki Odani , Ziwei Yang , Guang Shi , Yirong Kan , Zheng Chen , Renyuan Zhang

Sleep abnormalities can have severe health consequences. Automated sleep staging, i.e. labelling the sequence of sleep stages from the patient's physiological recordings, could simplify the diagnostic process. Previous work on automated…

Signal Processing · Electrical Eng. & Systems 2023-04-14 Konstantinos Kontras , Christos Chatzichristos , Huy Phan , Johan Suykens , Maarten De Vos

Emotion recognition based on EEG (electroencephalography) has been widely used in human-computer interaction, distance education and health care. However, the conventional methods ignore the adjacent and symmetrical characteristics of EEG…

Signal Processing · Electrical Eng. & Systems 2021-08-30 Xiangwen Deng , Junlin Zhu , Shangming Yang

In this paper, we explore how to use topological tools to compare dimension reduction methods. We first make a brief overview of some of the methods often used dimension reduction such as Isometric Feature Mapping, Laplacian Eigenmaps, Fast…

Geometric Topology · Mathematics 2023-06-06 Eddy Kwessi

Diagnosing sleep disorders is an important focus in neuroscience and engineering, as these conditions involve issues such as insufficient sleep, frequent awakenings, and difficulty reaching deep sleep. Accurate detection based on brain…

Neurons and Cognition · Quantitative Biology 2025-09-03 Mohammad Reza Yousefi , Reza Rahimi

Investigation of human brain states through electroencephalograph (EEG) signals is a crucial step in human-machine communications. However, classifying and analyzing EEG signals are challenging due to their noisy, nonlinear and…

Machine Learning · Statistics 2019-12-19 Farzana Nasrin , Christopher Oballe , David L. Boothe , Vasileios Maroulas

In recent years, deep learning has shown potential and efficiency in a wide area including computer vision, image and signal processing. Yet, translational challenges remain for user applications due to a lack of interpretability of…

Machine Learning · Computer Science 2022-07-12 Hamid Niknazar , Sara C. Mednick

This paper proposes a new approach to identifying patients with insomnia using a single EEG channel, without the need for sleep stage annotation. Data preprocessing, feature extraction, feature selection, and classification techniques are…

Computer Vision and Pattern Recognition · Computer Science 2024-12-16 Chan-Yun Yang , Nilantha Premakumara , Hooman Samani , Chinthaka Premachandra

Automatic sleep stage scoring is crucial for the diagnosis and treatment of sleep disorders. Although deep learning models have advanced the field, many existing models are computationally demanding and designed for single-channel…

Machine Learning · Computer Science 2026-03-02 Zhaowen Wang , Dongdong Zhou , Qi Xu , Fengyu Cong , Mohammad Al-Sa'd , Jenni Raitoharju

Automatic sleep staging plays a vital role in assessing sleep quality and diagnosing sleep disorders. Most existing methods rely heavily on long and continuous EEG recordings, which poses significant challenges for data acquisition in…

Machine Learning · Computer Science 2025-11-19 Lejun Ai , Yulong Li , Haodong Yi , Jixuan Xie , Yue Wang , Jia Liu , Min Chen , Rui Wang

We used convolutional neural networks (CNNs) for automatic sleep stage scoring based on single-channel electroencephalography (EEG) to learn task-specific filters for classification without using prior domain knowledge. We used an openly…

Machine Learning · Statistics 2016-10-07 Orestis Tsinalis , Paul M. Matthews , Yike Guo , Stefanos Zafeiriou

Efficiently identifying sleep stages is crucial for unraveling the intricacies of sleep in both preclinical and clinical research. The labor-intensive nature of manual sleep scoring, demanding substantial expertise, has prompted a surge of…

Machine Learning · Computer Science 2024-12-23 Shadi Sartipi , Mie Andersen , Natalie Hauglund , Celia Kjaerby , Verena Untiet , Maiken Nedergaard , Mujdat Cetin

Classification of sleep stages is essential for assessing sleep quality and diagnosing sleep disorders. However, manual inspection of EEG characteristics for each stage is time-consuming and prone to human error. Although machine learning…