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Benchmarking involves designing, running and disseminating rigorous performance assessments of methods, most often for data analysis and software tools, but the process can also be applied to experimental systems. Ideally, a benchmarking…

Other Quantitative Biology · Quantitative Biology 2026-02-12 Izaskun Mallona , Almut Luetge , Ben Carrillo , Daniel Incicau , Reto Gerber , Aidan Meara , Anthony Sonrel , Charlotte Soneson , Mark D. Robinson

Compound AI applications, composed from interactions between Large Language Models (LLMs), Machine Learning (ML) models, external tools and data sources are quickly becoming an integral workload in datacenters. Their diverse sub-components…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-04-14 Paramuth Samuthrsindh , Angel Cervantes , Varun Gohil , Gohar Irfan Chaudhry , Christina Delimitrou , Adam Belay

We provide an overview of the software engineering efforts and their impact in QMCPACK, a production-level ab-initio Quantum Monte Carlo open-source code targeting high-performance computing (HPC) systems. Aspects included are: (i)…

The selection, development, or comparison of machine learning methods in data mining can be a difficult task based on the target problem and goals of a particular study. Numerous publicly available real-world and simulated benchmark…

Machine Learning · Computer Science 2017-03-03 Randal S. Olson , William La Cava , Patryk Orzechowski , Ryan J. Urbanowicz , Jason H. Moore

ESCAPE is a free python package and framework for creating applications for simulating and fitting of X-ray and neutron scattering data with current support for specular reflectivity, polarized neutron reflectometry, high resolution X-ray…

Computational Engineering, Finance, and Science · Computer Science 2020-11-11 Denis Korolkov , Stepan Rakhimov

As architecture, systems, and data management communities pay greater attention to innovative big data systems and architectures, the pressure of benchmarking and evaluating these systems rises. Considering the broad use of big data…

Today, many scientific and engineering areas require high performance computing to perform computationally intensive experiments. For example, many advances in transport phenomena, thermodynamics, material properties, computational…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-07-15 K. G. Kapanova , J. M. Sellier

High-performance computing (HPC) systems are a complex combination of software, processors, memory, networks, and storage systems characterized by frequent disruptive technological advances. Anomalous behavior has to be manually diagnosed…

Distributed, Parallel, and Cluster Computing · Computer Science 2013-02-19 Charng-Da Lu

As computing system become more complex, it is becoming harder for programmers to keep their codes optimized as the hardware gets updated. Autotuners try to alleviate this by hiding as many architecture-based optimization details as…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-03-17 Jacob O. Tørring , Ben van Werkhoven , Filip Petrovic , Floris-Jan Willemsen , Jirí Filipovic , Anne C. Elster

Quantum processors are now able to run quantum circuits that are infeasible to simulate classically, creating a need for benchmarks that assess a quantum processor's rate of errors when running these circuits. Here, we introduce a general…

Quantum Physics · Physics 2025-10-29 Jordan Hines , Timothy Proctor

Through the 1990s, HPC centers at national laboratories, universities, and other large sites designed distributed system architectures and software stacks that enabled extreme-scale computing. By the 2010s, these centers were eclipsed by…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-04-28 Benjamin S. Allen , Matthew A. Ezell , Paul Peltz , Doug Jacobsen , Eric Roman , Cory Lueninghoener , J. Lowell Wofford

Quantum computers have the potential to provide an advantage over classical computers in a number of areas. Numerous metrics to benchmark the performance of quantum computers, ranging from their individual hardware components to entire…

The training of large language models (LLMs) requires substantial computational resources, complex software stacks, and carefully designed workflows to achieve scalability and efficiency. This report presents best practices and insights…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-05-08 Carolin Penke , Chelsea Maria John , Jan Ebert , Stefan Kesselheim , Andreas Herten

As large language models (LLMs) continue to advance, the need for up-to-date and well-organized benchmarks becomes increasingly critical. However, many existing datasets are scattered, difficult to manage, and make it challenging to perform…

Machine Learning · Computer Science 2025-06-03 Eunsu Kim , Haneul Yoo , Guijin Son , Hitesh Patel , Amit Agarwal , Alice Oh

We present a graph processing benchmark suite with the goal of helping to standardize graph processing evaluations. Fewer differences between graph processing evaluations will make it easier to compare different research efforts and…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-05-18 Scott Beamer , Krste Asanović , David Patterson

Modern scientific software stacks have become extremely complex, using many programming models and libraries to exploit a growing variety of GPUs and accelerators. Package managers can mitigate this complexity using dependency solvers, but…

Software Engineering · Computer Science 2022-10-18 Todd Gamblin , Massimiliano Culpo , Gregory Becker , Sergei Shudler

Usability evaluation has received considerable attention from both the research and practice communities. While there are many evaluation tools available, the Software Usability Scale (SUS) is the most widely used. In this paper, we…

Software Engineering · Computer Science 2024-10-25 Paweł Weichbroth , Małgorzata Giedrowicz

By bringing together code, text, and examples, Jupyter notebooks have become one of the most popular means to produce scientific results in a productive and reproducible way. As many of the notebook authors are experts in their scientific…

Software Engineering · Computer Science 2019-06-13 Jiawei Wang , Li Li , Andreas Zeller

The Minnesota Supercomputing Institute has implemented Jupyterhub and the Jupyter notebook server as a general-purpose point-of-entry to interactive high performance computing services. This mode of operation runs counter to traditional…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-07-27 Michael Milligan