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Genetic dispositions play a major role in individual disease risk and treatment response. Genomic medicine, in which medical decisions are refined by genetic information of particular patients, is becoming increasingly important. Here we…

Other Computer Science · Computer Science 2011-09-30 Matthias Samwald , Holger Stenzhorn , Michel Dumontier , M. Scott Marshall , Joanne Luciano , Klaus-Peter Adlassnig

Distributed data analysis without revealing the individual data has recently attracted significant attention in several applications. A collaborative data analysis through sharing dimensionality reduced representations of data has been…

Machine Learning · Computer Science 2021-01-28 Akira Imakura , Anna Bogdanova , Takaya Yamazoe , Kazumasa Omote , Tetsuya Sakurai

In this paper we propose a data dissemination platform that supports data security and different privacy levels even when the platform and the data are hosted by untrusted infrastructures. The proposed system aims at enabling an application…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-03-05 Lilia Sampaio , Fábio Silva , Amanda Souza , Andrey Brito , Pascal Felber

The rapid development of network science and technologies depends on shareable datasets. Currently, there is no standard practice for reporting and sharing network datasets. Some network dataset providers only share links, while others…

Social and Information Networks · Computer Science 2022-06-09 Xinyi Zheng , Ryan A. Rossi , Nesreen Ahmed , Dominik Moritz

Modern biomedical applications often involve time-series data, from high-throughput phenotyping of model organisms, through to individual disease diagnosis and treatment using biomedical data streams. Data and tools for time-series analysis…

Databases · Computer Science 2019-05-06 Ben D. Fulcher , Carl H. Lubba , Sarab S. Sethi , Nick S. Jones

Decentralized Online Social Networks (DOSNs) have been proposed as an alternative solution to the current centralized Online Social Networks (OSNs). Online Social Networks are based on centralized architecture (e.g., Facebook, Twitter, or…

Cryptography and Security · Computer Science 2019-10-29 Mohsin Ur Rahman , Fabrizio Baiardi , Barbara Guidi , Laura Ricci

This article introduces the Data Retrieval Web Engine (also referred to as doctor web), a flexible and modular tool for extracting structured data from web pages using a simple query language. We discuss the engineering challenges addressed…

Databases · Computer Science 2025-04-09 Ylli Prifti , Alessandro Provetti , Pasquale de Meo

Analyzing a functional genomics experiment, such as ATAC-, ChIP- or RNA-sequencing, requires reference data including a genome assembly and gene annotation. These resources can generally be retrieved from different organizations and in…

Genomics · Quantitative Biology 2022-09-05 Siebren Frölich , Maarten van der Sande , Tilman Schäfers , Simon J. van Heeringen

We present Clinica (www.clinica.run), an open-source software platform designed to make clinical neuroscience studies easier and more reproducible. Clinica aims for researchers to i) spend less time on data management and processing, ii)…

Dependency analysis is a program analysis that determines potential data flow between program points. While it is not a security analysis per se, it is a viable basis for investigating data integrity, for ensuring confidentiality, and for…

Programming Languages · Computer Science 2013-05-30 Matthias Keil , Peter Thiemann

Research involving privacy-sensitive data has always been constrained by data scarcity, standing in sharp contrast to other areas that have benefited from data scaling. This challenge is becoming increasingly urgent as modern AI…

Data for good implies unfettered access to data. But data owners must be conservative about how, when, and why they share data or risk violating the trust of the people they aim to help, losing their funding, or breaking the law. Data…

Computers and Society · Computer Science 2017-10-25 Bill Howe , Julia Stoyanovich , Haoyue Ping , Bernease Herman , Matt Gee

This paper introduces the concept of Open Source Intelligence (OSINT) as an important application in intelligent profiling of individuals. With a variety of tools available, significant data shall be obtained on an individual as a…

Computers and Society · Computer Science 2024-09-05 Arjun Anand , Buvanasri A K , Meenakshi R , Karthika S , Ashok Kumar Mohan

Over the past decade, we have witnessed the Internet becoming increasingly centralized in the hands of a small number of giant technology firms, that control many of the most popular applications and the content they host on their…

Networking and Internet Architecture · Computer Science 2021-08-02 Raman Singh , Andrew Donegan , Hitesh Tewari

The need for high-level autonomy and robustness of autonomous systems for missions in dynamic and remote environment has pushed developers to come up with new software architectures. A common architecture style is to summarize the…

Formal Languages and Automata Theory · Computer Science 2022-09-29 Baptiste Pelletier , Charles Lesire , David Doose , Karen Godary-Dejean , Charles Dramé-Maigné

The Domain Name System (DNS) was created to resolve the IP addresses of the web servers to easily remembered names. When it was initially created, security was not a major concern; nowadays, this lack of inherent security and trust has…

Cryptography and Security · Computer Science 2020-08-17 Pavlos Papadopoulos , Nikolaos Pitropakis , William J. Buchanan , Owen Lo , Sokratis Katsikas

Clinicians are interested in better understanding complex diseases, such as cancer or rare diseases, so they need to produce and exchange data to mutualize sources and join forces. To do so and ensure privacy, a natural way consists in…

Databases · Computer Science 2025-09-29 Nelly Barret , Anna Bernasconi , Boris Bikbov , Pietro Pinoli

Sharing clinical research data is key for increasing the pace of medical discoveries that improve human health. However, concern about study participants' privacy, confidentiality, and safety is a major factor that deters researchers from…

Online tracking is a widespread practice on the web with questionable ethics, security, and privacy concerns. While web tracking can offer personalized and curated content to Internet users, it operates as a sophisticated surveillance…

Cryptography and Security · Computer Science 2025-01-07 Seyed Ali Akhavani , Engin Kirda , Amin Kharraz

The machine learning community currently has no standardized process for documenting datasets, which can lead to severe consequences in high-stakes domains. To address this gap, we propose datasheets for datasets. In the electronics…