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Related papers: GeoPlant: Spatial Plant Species Prediction Dataset

200 papers

We discuss species distribution models (SDM) for biodiversity studies in ecology. SDM plays an important role to estimate abundance of a species based on environmental variables that are closely related with the habitat of the species. The…

Applications · Statistics 2023-05-01 Osamu Komori , Yusuke Saigusa , Shinto Eguchi

Climate change poses an extreme threat to biodiversity, making it imperative to efficiently model the geographical range of different species. The availability of large-scale remote sensing images and environmental data has facilitated the…

Computer Vision and Pattern Recognition · Computer Science 2024-12-30 Theresa Chen , Yao-Yi Chiang

Species distribution models usually attempt to explain presence-absence or abundance of a species at a site in terms of the environmental features (socalled abiotic features) present at the site. Historically, such models have considered…

Methodology · Statistics 2018-09-25 Shinichiro Shirota , Alan E. Gelfand , Sudipto Banerjee

With the exacerbation of the biodiversity and climate crises, macroecological pursuits such as global biodiversity mapping become more urgent. Remote sensing offers a wealth of Earth observation data for ecological studies, but the scarcity…

Computer Vision and Pattern Recognition · Computer Science 2025-10-21 Elena Plekhanova , Damien Robert , Johannes Dollinger , Emilia Arens , Philipp Brun , Jan Dirk Wegner , Niklaus Zimmermann

Species distribution models (SDMs) are increasingly applied across macroscales. Such models typically assume that a single set of regression coefficients can adequately describe species-environment relationships and/or population trends.…

1. Joint Species Distribution models (JSDMs) explain spatial variation in community composition by contributions of the environment, biotic associations, and possibly spatially structured residual covariance. They show great promise as a…

Quantitative Methods · Quantitative Biology 2023-03-28 Maximilian Pichler , Florian Hartig

In this paper we present GeoThinneR, an R package for efficient and flexible spatial thinning of species occurrence data. Spatial thinning is a widely used preprocessing step in species distribution modeling (SDM) that can help reduce…

Populations and Evolution · Quantitative Biology 2025-05-14 J. Mestre-Tomás

Accurately predicting the geographic ranges of species is crucial for assisting conservation efforts. Traditionally, range maps were manually created by experts. However, species distribution models (SDMs) and, more recently, deep…

Quantitative Methods · Quantitative Biology 2024-08-29 Filip Dorm , Christian Lange , Scott Loarie , Oisin Mac Aodha

In ecology we may find scenarios where the same phenomenon (species occurrence, species abundance, etc.) is observed using two different types of samplers. For instance, species data can be collected from scientific sampling with a…

Species distribution models (SDMs) are key tools in ecology, conservation and management of natural resources. They are commonly trained by scientific survey data but, since surveys are expensive, there is a need for complementary sources…

Methodology · Statistics 2026-04-03 Karel Kaurila , Sanna Kuningas , Antti Lappalainen , Jarno Vanhatalo

In the face of significant biodiversity decline, species distribution models (SDMs) are essential for understanding the impact of climate change on species habitats by connecting environmental conditions to species occurrences.…

Machine Learning · Computer Science 2024-03-13 Robin Zbinden , Nina van Tiel , Marc Rußwurm , Devis Tuia

Estimating the geographical range of a species from sparse observations is a challenging and important geospatial prediction problem. Given a set of locations where a species has been observed, the goal is to build a model to predict…

Accurate information on the distribution of vegetation species is used as a proxy for the health of an ecosystem, a currency of international environmental treaties, and a necessary planning tool for forest preservation and rehabilitation,…

Methodology · Statistics 2023-09-20 Henry Scharf , Jonathan Schierbaum , Hana Matsumoto , Tim Assal

The post-2020 global biodiversity framework needs ambitious, research-based targets. Estimating the accelerated extinction risk due to climate change is critical. The International Union for Conservation of Nature (IUCN) measures the…

Populations and Evolution · Quantitative Biology 2024-01-12 Joaquim Estopinan , Pierre Bonnet , Maximilien Servajean , François Munoz , Alexis Joly

Given inputs of diverse soil characteristics and climate data gathered from various regions, we aimed to build a model to predict accurate land emissions. The problem is important since accurate quantification of the carbon cycle in…

Machine Learning · Computer Science 2025-04-24 Arun Sharma , Majid Farhadloo , Mingzhou Yang , Ruolei Zeng , Subhankar Ghosh , Shashi Shekhar

Protecting and restoring forest ecosystems is critical for biodiversity conservation and carbon sequestration. Forest monitoring on a global scale is essential for prioritizing and assessing conservation efforts. Satellite-based remote…

Computer Vision and Pattern Recognition · Computer Science 2024-06-28 Luis Miguel Pazos-Outón , Cristina Nader Vasconcelos , Anton Raichuk , Anurag Arnab , Dan Morris , Maxim Neumann

Habitats integrate the abiotic conditions, vegetation composition and structure that support biodiversity and sustain nature's contributions to people. Most habitats face mounting pressures from human activities, which requires accurate,…

The availability of well-curated datasets has driven the success of Machine Learning (ML) models. Despite greater access to earth observation data in agriculture, there is a scarcity of curated and labelled datasets, which limits the…

Computer Vision and Pattern Recognition · Computer Science 2023-12-04 Depanshu Sani , Sandeep Mahato , Sourabh Saini , Harsh Kumar Agarwal , Charu Chandra Devshali , Saket Anand , Gaurav Arora , Thiagarajan Jayaraman

Nonstationary and non-Gaussian spatial data are common in various fields, including ecology (e.g., counts of animal species), epidemiology (e.g., disease incidence counts in susceptible regions), and environmental science (e.g.,…

Methodology · Statistics 2024-04-01 Remy MacDonald , Benjamin Seiyon Lee

This paper introduces an innovative dataset specifically crafted for challenging agricultural settings (a greenhouse), where achieving precise localization is of paramount importance. The dataset was gathered using a mobile platform…