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Cell boundary information is crucial for analyzing cell behaviors from time-lapse microscopy videos. Existing supervised cell segmentation tools, such as ImageJ, require tuning various parameters and rely on restrictive assumptions about…

Applications · Statistics 2026-01-27 Laura Baracaldo , Blythe King , Haoran Yan , Yizi Lin , Nina Miolane , Mengyang Gu

Transformers have achieved great success in effectively processing sequential data such as text. Their architecture consisting of several attention and feedforward blocks can model relations between elements of a sequence in parallel…

Machine Learning · Computer Science 2025-02-20 Jaemu Heo , Eldor Fozilov , Hyunmin Song , Taehwan Kim

Convolutional neural networks (CNNs) have achieved state-of-the-art performance for automatic medical image segmentation. However, they have not demonstrated sufficiently accurate and robust results for clinical use. In addition, they are…

Computer Vision and Pattern Recognition · Computer Science 2018-07-23 Guotai Wang , Wenqi Li , Maria A. Zuluaga , Rosalind Pratt , Premal A. Patel , Michael Aertsen , Tom Doel , Anna L. David , Jan Deprest , Sebastien Ourselin , Tom Vercauteren

Convolutional Neural Networks (CNNs) have exhibited strong performance in medical image segmentation tasks by capturing high-level (local) information, such as edges and textures. However, due to the limited field of view of convolution…

Image and Video Processing · Electrical Eng. & Systems 2024-02-02 Hao Li , Han Liu , Dewei Hu , Xing Yao , Jiacheng Wang , Ipek Oguz

Introducing explicit constraints on the structural predictions has been an effective way to improve the performance of semantic segmentation models. Existing methods are mainly based on insufficient hand-crafted rules that only partially…

Computer Vision and Pattern Recognition · Computer Science 2019-07-30 Boxi Wu , Shuai Zhao , Wenqing Chu , Zheng Yang , Deng Cai

High-resolution semantic segmentation requires substantial computational resources. Traditional approaches in the field typically downscale the input images before processing and then upscale the low-resolution outputs back to their…

Computer Vision and Pattern Recognition · Computer Science 2024-02-09 Ritambhara Singh , Abhishek Jain , Pietro Perona , Shivani Agarwal , Junfeng Yang

Computed Tomography (CT) based precise prostate segmentation for treatment planning is challenging due to (1) the unclear boundary of the prostate derived from CT's poor soft tissue contrast and (2) the limitation of convolutional neural…

Image and Video Processing · Electrical Eng. & Systems 2023-07-20 Chengyin Li , Yao Qiang , Rafi Ibn Sultan , Hassan Bagher-Ebadian , Prashant Khanduri , Indrin J. Chetty , Dongxiao Zhu

This paper aims to address the problem of supervised monocular depth estimation. We start with a meticulous pilot study to demonstrate that the long-range correlation is essential for accurate depth estimation. Therefore, we propose to…

Computer Vision and Pattern Recognition · Computer Science 2023-10-13 Zhenyu Li , Zehui Chen , Xianming Liu , Junjun Jiang

The initial seed based on the convolutional neural network (CNN) for weakly supervised semantic segmentation always highlights the most discriminative regions but fails to identify the global target information. Methods based on…

Computer Vision and Pattern Recognition · Computer Science 2023-03-21 Chunmeng Liu , Guangyao Li , Yao Shen , Ruiqi Wang

Medical segmentation plays an important role in clinical applications like radiation therapy and surgical guidance, but acquiring clinically acceptable results is difficult. In recent years, progress has been witnessed with the success of…

Computer Vision and Pattern Recognition · Computer Science 2025-06-09 Xin Zhang , Dongdong Meng , Sheng Li

Region proposal based methods like R-CNN and Faster R-CNN models have proven to be extremely successful in object detection and segmentation tasks. Recently, Transformers have also gained popularity in the domain of Computer Vision, and are…

Computer Vision and Pattern Recognition · Computer Science 2021-10-07 Deepanshu Pandey , Pradyumna Gupta , Sumit Bhattacharya , Aman Sinha , Rohit Agarwal

While biological vision systems rely heavily on feedback connections to iteratively refine perception, most artificial neural networks remain purely feedforward, processing input in a single static pass. In this work, we propose a…

Computer Vision and Pattern Recognition · Computer Science 2025-07-15 David Calhas , Arlindo L. Oliveira

In this paper, we aim to improve the performance of semantic image segmentation in a semi-supervised setting in which training is effectuated with a reduced set of annotated images and additional non-annotated images. We present a method…

Computer Vision and Pattern Recognition · Computer Science 2019-10-31 Jizong Peng , Guillermo Estrada , Marco Pedersoli , Christian Desrosiers

Semantic image segmentation is one of fastest growing areas in computer vision with a variety of applications. In many areas, such as robotics and autonomous vehicles, semantic image segmentation is crucial, since it provides the necessary…

Computer Vision and Pattern Recognition · Computer Science 2020-09-29 Georgios Takos

In the past few years, convolutional neural networks (CNNs), particularly U-Net, have been the prevailing technique in the medical image processing era. Specifically, the seminal U-Net, as well as its alternatives, have successfully managed…

Computer Vision and Pattern Recognition · Computer Science 2022-07-28 Reza Azad , Mohammad T. AL-Antary , Moein Heidari , Dorit Merhof

We propose a cell segmentation method for analyzing images of densely clustered cells. The method combines the strengths of marker-controlled watershed transformation and a convolutional neural network (CNN). We demonstrate the method…

Image and Video Processing · Electrical Eng. & Systems 2020-04-06 Filip Lux , Petr Matula

Semantic segmentation using deep neural networks has been widely explored to generate high-level contextual information for autonomous vehicles. To acquire a complete $180^\circ$ semantic understanding of the forward surroundings, we…

Computer Vision and Pattern Recognition · Computer Science 2019-04-17 Wei Zhou , Alex Zyner , Stewart Worrall , Eduardo Nebot

State-of-the-art methods for Transformer-based semantic segmentation typically adopt Transformer decoders that are used to extract additional embeddings from image embeddings via cross-attention, refine either or both types of embeddings…

Computer Vision and Pattern Recognition · Computer Science 2025-10-10 Qishuai Wen , Chun-Guang Li

Segmentation of nanoscale electron microscopy (EM) images is crucial but still challenging in connectomics research. One reason for this is that none of the existing segmentation methods are error-free, so they require proofreading, which…

Computer Vision and Pattern Recognition · Computer Science 2022-03-14 Khoa Tuan Nguyen , Ganghee Jang , Tran Anh Tuan , Won-ki Jeong

While CNNs were long considered state of the art for image processing, the introduction of Transformer architectures has challenged this position. While achieving excellent results in image classification and segmentation, Transformers…

Computer Vision and Pattern Recognition · Computer Science 2025-03-25 DeShin Hwa , Tobias Holmes , Klaus Drechsler