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Surveillance data serving for epidemic alert systems are typically fully aggregated in space. However, epidemics may be spatially heterogeneous, undergoing distinct dynamics in distinct regions of the surveillance area. We unveil this in…

Populations and Evolution · Quantitative Biology 2018-03-30 Pavel Polyakov , Cécile Souty , Pierre-Yves Böelle , Romulus Breban

This paper presents a predictive model for Influenza-Like-Illness, based on Twitter traffic. We gather data from Twitter based on a set of keywords used in the Influenza wikipedia page, and perform feature selection over all words used in 3…

Social and Information Networks · Computer Science 2021-11-23 Katerina Katsani-Geronymaki , Polyvios Pratikakis

This article describes a new method for estimating weekly incidence (new onset) of symptoms consistent with Influenza and COVID-19, using data from the Flutracking survey. The method mitigates some of the known self-selection and…

Individuals in low socioeconomic brackets are considered at-risk for developing influenza-related complications and often exhibit higher than average influenza-related hospitalization rates. This disparity has been attributed to various…

Accurately predicting travel time information can be helpful for travelers. This study proposes a framework for predicting network-level travel time index (TTI) using machine learning models. A case study was performed on more than 50,000…

Applications · Statistics 2026-02-24 Yufei Ai , Yao Yu , Wenjing Pu , Lu Gao , Yihao Ren

Influenza, an infectious disease, causes many deaths worldwide. Predicting influenza victims during epidemics is an important task for clinical, hospital, and community outbreak preparation. On-line user-generated contents (UGC), primarily…

Computers and Society · Computer Science 2021-04-15 Taichi Murayama , Nobuyuki Shimizu , Sumio Fujita , Shoko Wakamiya , Eiji Aramaki

The seasonality of respiratory diseases (common cold, influenza, etc.) is a well-known phenomenon studied from ancient times. The development of predictive models is still not only an actual unsolved problem of mathematical epidemiology but…

Populations and Evolution · Quantitative Biology 2014-04-28 Eugene B. Postnikov , Dmitry V. Tatarenkov

Accurate and representative data is vital for precisely reporting the impact of influenza in healthcare systems. Northern hemisphere winter 2022/23 experienced the most substantial influenza wave since the COVID-19 pandemic began in 2020.…

Populations and Evolution · Quantitative Biology 2023-10-26 Jonathon Mellor , Rachel Christie , James Guilder , Robert S Paton , Suzanne Elgohari , Conall Watson , Sarah Deeny , Thomas Ward

Epidemics of influenza are major public health concerns. Since influenza prediction always relies on the weekly clinical or laboratory surveillance data, typically the weekly Influenza-like illness (ILI) rate series, accurate…

Machine Learning · Computer Science 2021-10-28 Siyue Yang , Yukun Bao

Conformal Inference (CI) is a popular approach for generating finite sample prediction intervals based on the output of any point prediction method when data are exchangeable. Adaptive Conformal Inference (ACI) algorithms extend CI to the…

Computation · Statistics 2023-12-04 Herbert Susmann , Antoine Chambaz , Julie Josse

Distributional forecasts are important for a wide variety of applications, including forecasting epidemics. Often, forecasts are miscalibrated, or unreliable in assigning uncertainty to future events. We present a recalibration method that…

Machine Learning · Computer Science 2023-01-11 Aaron Rumack , Ryan J. Tibshirani , Roni Rosenfeld

Forecasting the future course of epidemics has always been one of the main goals of epidemic modelling. This chapter reviews statistical methods to quantify the accuracy of epidemic forecasts. We distinguish point and probabilistic…

Methodology · Statistics 2019-12-19 Leonhard Held , Sebastian Meyer

Accurate real-time tracking of influenza outbreaks helps public health officials make timely and meaningful decisions that could save lives. We propose an influenza tracking model, ARGO (AutoRegression with GOogle search data), that uses…

Applications · Statistics 2015-11-17 Shihao Yang , Mauricio Santillana , S. C. Kou

We develop and compare model-error representation schemes derived from data assimilation increments and nudging tendencies in multi-decadal simulations of the community atmosphere model, version 6. Each scheme applies a bias correction…

Atmospheric and Oceanic Physics · Physics 2023-08-30 William E. Chapman , Judith Berner

The impact of climate conditions on influenza epidemiology has mostly been studied by addressing a singular aspect of transmission and a climate variable correlating to it. As climate change unfolds at an unprecedented rate, we urgently…

Quantitative Methods · Quantitative Biology 2025-01-24 Branislava Lalic , Vladimir Koci , Ana Firanj Sremac , Zorana Jovanovic Andersen

Machine learning methods have seen increased application to geospatial environmental problems, such as precipitation nowcasting, haze forecasting, and crop yield prediction. However, many of the machine learning methods applied to mosquito…

Populations and Evolution · Quantitative Biology 2024-07-09 Adam Tonks , Trevor Harris , Bo Li , William Brown , Rebecca Smith

In this article, we focus on the analysis of the potential factors driving the spread of influenza, and possible policies to mitigate the adverse effects of the disease. To be precise, we first invoke discrete Fourier transform (DFT) to…

Machine Learning · Computer Science 2019-12-09 Ziming Liu , Yixuan Wang , Zizhao Han , Dian Wu

We develop a multiple compartment Susceptible-Infected-Recovered (SIR) model to analyze the spread of several infectious diseases through different geographic areas. Additionally, we propose a data-quality sensitive optimization framework…

Populations and Evolution · Quantitative Biology 2019-06-21 Inbar Seroussi , Nir Levy , Daniela Paolotti , Nir Sochen , Elad Yom-Tov

Background: Over the past few decades, numerous forecasting methods have been proposed in the field of epidemic forecasting. Such methods can be classified into different categories such as deterministic vs. probabilistic, comparative…

Flu circulates all over the world. The worldwide infection places a substantial burden on people's health every year. Regardless of the characteristic of the worldwide circulation of flu, most previous studies focused on regional prediction…

Computers and Society · Computer Science 2021-02-17 Jie Zhang , Kazumitsu Nawata , Hongyan Wu