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We present Marian, an efficient and self-contained Neural Machine Translation framework with an integrated automatic differentiation engine based on dynamic computation graphs. Marian is written entirely in C++. We describe the design of…

This paper describes the submissions of the "Marian" team to the WNMT 2018 shared task. We investigate combinations of teacher-student training, low-precision matrix products, auto-tuning and other methods to optimize the Transformer model…

Computation and Language · Computer Science 2018-05-31 Marcin Junczys-Dowmunt , Kenneth Heafield , Hieu Hoang , Roman Grundkiewicz , Anthony Aue

New and upgraded radio interferometers produce data at massive rates and will require significant improvements in analysis techniques to reach their promised levels of performance in a routine manner. Until these techniques are fully…

Instrumentation and Methods for Astrophysics · Physics 2012-06-29 Peter K. G. Williams , Casey J. Law , Geoffrey C. Bower

Simultaneously modeling source code and natural language has many exciting applications in automated software development and understanding. Pursuant to achieving such technology, we introduce PyMT5, the Python method text-to-text transfer…

Machine Learning · Computer Science 2020-10-08 Colin B. Clement , Dawn Drain , Jonathan Timcheck , Alexey Svyatkovskiy , Neel Sundaresan

This paper introduces the design and implementation of PyOptInterface, a modeling language for mathematical optimization embedded in Python programming language. PyOptInterface uses lightweight and compact data structure to bridge…

Mathematical Software · Computer Science 2024-05-17 Yue Yang , Chenhui Lin , Luo Xu , Wenchuan Wu

Python has become the de-facto language for training deep neural networks, coupling a large suite of scientific computing libraries with efficient libraries for tensor computation such as PyTorch or TensorFlow. However, when models are used…

Machine Learning · Computer Science 2021-04-02 Zachary DeVito , Jason Ansel , Will Constable , Michael Suo , Ailing Zhang , Kim Hazelwood

Python is a popular programming language known for its flexibility, usability, readability, and focus on developer productivity. The quantum software community has adopted Python on a number of large-scale efforts due to these…

Quantum Physics · Physics 2021-05-12 Thien Nguyen , Alexander J. McCaskey

Smarter applications are making better use of the insights gleaned from data, having an impact on every industry and research discipline. At the core of this revolution lies the tools and the methods that are driving it, from processing the…

Machine Learning · Computer Science 2020-04-01 Sebastian Raschka , Joshua Patterson , Corey Nolet

Scientific computing requires handling large linear models, which are often composed of structured matrices. With increasing model size, dense representations quickly become infeasible to compute or store. Matrix-free implementations are…

Mathematical Software · Computer Science 2021-11-30 Christoph Wilfried Wagner , Sebastian Semper , Jan Kirchhof

Python is one of the most commonly used programming languages in industry and education. Its English keywords and built-in functions/modules allow it to come close to pseudo-code in terms of its readability and ease of writing. However,…

Computation and Language · Computer Science 2025-04-17 Joshua Otten , Antonios Anastasopoulos , Kevin Moran

The wavelet scattering transform is an invariant signal representation suitable for many signal processing and machine learning applications. We present the Kymatio software package, an easy-to-use, high-performance Python implementation of…

Deep learning-based vision is characterized by intricate frameworks that often necessitate a profound understanding, presenting a barrier to newcomers and limiting broad adoption. With many researchers grappling with the constraints of…

Computer Vision and Pattern Recognition · Computer Science 2023-11-13 Fabi Prezja

PiML (read $\pi$-ML, /`pai`em`el/) is an integrated and open-access Python toolbox for interpretable machine learning model development and model diagnostics. It is designed with machine learning workflows in both low-code and high-code…

Machine Learning · Computer Science 2023-12-21 Agus Sudjianto , Aijun Zhang , Zebin Yang , Yu Su , Ningzhou Zeng

Machine learning solutions are very popular in the field of chemoinformatics, where they have numerous applications, such as novel drug discovery or molecular property prediction. Molecular fingerprints are algorithms commonly used for…

Quantitative Methods · Quantitative Biology 2024-04-01 Michał Szafarczyk , Piotr Ludynia , Przemysław Kukla

Background: The study of genome-scale metabolic models and their underlying networks is one of the most important fields in systems biology. The complexity of these models and their description makes the use of computational tools an…

Molecular Networks · Quantitative Biology 2012-12-03 D. Gamermann , A. Montagud , R. A. Jaime Infante , J. Triana , P. F. de Córdoba , J. F. Urchueguía

This paper presents an open-source neural machine translation toolkit named CytonMT (https://github.com/arthurxlw/cytonMt). The toolkit is built from scratch only using C++ and NVIDIA's GPU-accelerated libraries. The toolkit features…

Computation and Language · Computer Science 2018-06-05 Xiaolin Wang , Masao Utiyama , Eiichiro Sumita

sQUlearn introduces a user-friendly, NISQ-ready Python library for quantum machine learning (QML), designed for seamless integration with classical machine learning tools like scikit-learn. The library's dual-layer architecture serves both…

As neuroimaging databases grow in size and complexity, the time researchers spend investigating and managing the data increases to the expense of data analysis. As a result, investigators rely more and more heavily on scripting using…

Mathematical models allow us to gain a deeper understanding of real-world dynamical systems. One of the most powerful mathematical frameworks for modeling real-world phenomena are systems of differential equations. In the majority of fields…

Disordered Systems and Neural Networks · Physics 2023-05-02 Richard Gast , Thomas R. Knösche , Ann Kennedy

Background and Objective: Deep learning enables tremendous progress in medical image analysis. One driving force of this progress are open-source frameworks like TensorFlow and PyTorch. However, these frameworks rarely address issues…

Image and Video Processing · Electrical Eng. & Systems 2021-04-29 Alain Jungo , Olivier Scheidegger , Mauricio Reyes , Fabian Balsiger
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