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Large tree structures are ubiquitous and real-world relational datasets often have information associated with nodes (e.g., labels or other attributes) and edges (e.g., weights or distances) that need to be communicated to the viewers. Yet,…

Computational Geometry · Computer Science 2023-05-18 Kathryn Gray , Mingwei Li , Reyan Ahmed , Md. Khaledur Rahman , Ariful Azad , Stephen Kobourov , Katy Börner

Motivated by applications in social and biological network analysis, we introduce a new form of agnostic clustering termed~\emph{motif correlation clustering}, which aims to minimize the cost of clustering errors associated with both edges…

Data Structures and Algorithms · Computer Science 2018-11-07 Pan Li , Gregory J. Puleo , Olgica Milenkovic

The widespread relevance of increasingly complex networks requires methods to extract meaningful coarse-grained representations of such systems. For undirected graphs, standard community detection methods use criteria largely based on…

Physics and Society · Physics 2010-12-14 Kathryn Cooper , Mauricio Barahona

Force-directed algorithms are widely used to generate aesthetically pleasing layouts of graphs or networks arisen in many scientific disciplines. To visualize large-scale graphs, several parallel algorithms have been discussed in the…

Social and Information Networks · Computer Science 2020-02-26 Md. Khaledur Rahman , Majedul Haque Sujon , Ariful Azad

Visualization of the adjacency matrix enables us to capture macroscopic features of a network when the matrix elements are aligned properly. Community structure, a network consisting of several densely connected components, is a…

Physics and Society · Physics 2023-07-11 Masaki Ochi , Tatsuro Kawamoto

Many problems can be presented in an abstract form through a wide range of binary objects and relations which are defined over problem domain. In these problems, graphical demonstration of defined binary objects and solutions is the most…

Graphics · Computer Science 2016-03-24 Mohammadreza Ashouri , Ali Golshani , Dara Moazzmi , Mandana Ghasemi

Node-link diagrams are widely used to facilitate network explorations. However, when using a graph drawing technique to visualize networks, users often need to tune different algorithm-specific parameters iteratively by comparing the…

Human-Computer Interaction · Computer Science 2019-10-10 Yong Wang , Zhihua Jin , Qianwen Wang , Weiwei Cui , Tengfei Ma , Huamin Qu

Clustering a graph means identifying internally dense subgraphs which are only sparsely interconnected. Formalizations of this notion lead to measures that quantify the quality of a clustering and to algorithms that actually find…

Data Structures and Algorithms · Computer Science 2011-12-12 Robert Görke , Andrea Schumm , Dorothea Wagner

Even though clustering trajectory data attracted considerable attention in the last few years, most of prior work assumed that moving objects can move freely in an euclidean space and did not consider the eventual presence of an underlying…

Machine Learning · Computer Science 2012-10-04 Mohamed Khalil El Mahrsi , Fabrice Rossi

This work investigates and compares the performance of node-link diagrams, adjacency matrices, and bipartite layouts for visualizing networks. In a crowd-sourced user study (n = 150), we measure the task accuracy and completion time of the…

Human-Computer Interaction · Computer Science 2022-08-10 Moataz Abdelaal , Nathan D. Schiele , Katrin Angerbauer , Kuno Kurzhals , Michael Sedlmair , Daniel Weiskopf

Scatterplots are among the most widely used visualization techniques. Compelling scatterplot visualizations improve understanding of data by leveraging visual perception to boost awareness when performing specific visual analytic tasks.…

Human-Computer Interaction · Computer Science 2022-07-08 Ghulam Jilani Quadri , Jennifer Adorno Nieves , Brenton M. Wiernik , Paul Rosen

Network embedding aims to represent each node in a network as a low-dimensional feature vector that summarizes the given node's (extended) network neighborhood. The nodes' feature vectors can then be used in various downstream machine…

Social and Information Networks · Computer Science 2018-05-22 Shawn Gu , Tijana Milenkovic

Interpreting the massive volume of security alerts is a significant challenge in Security Operations Centres (SOCs). Effective contextualisation is important, enabling quick distinction between genuine threats and benign activity to…

Cryptography and Security · Computer Science 2025-09-19 Magnus Wiik Eckhoff , Peter Marius Flydal , Siem Peters , Martin Eian , Jonas Halvorsen , Vasileios Mavroeidis , Gudmund Grov

High-dimensional data analysis typically focuses on low-dimensional structure, often to aid interpretation and computational efficiency. Graphical models provide a powerful methodology for learning the conditional independence structure in…

Methodology · Statistics 2024-09-13 Maria De Iorio , Willem van den Boom , Alexandros Beskos , Ajay Jasra , Andrea Cremaschi

The unsupervised learning of community structure, in particular the partitioning vertices into clusters or communities, is a canonical and well-studied problem in exploratory graph analysis. However, like most graph analyses the…

Machine Learning · Computer Science 2020-07-27 Benjamin W. Priest , Alec Dunton , Geoffrey Sanders

Dynamic networks reflect temporal changes occurring to the graph's structure and are used to model a wide variety of problems in many application fields. We investigate the design space of dynamic graph visualization along two major…

Human-Computer Interaction · Computer Science 2022-09-07 Velitchko Filipov , Alessio Arleo , Markus Bögl , Silvia Miksch

Due to the massive size of modern network data, local algorithms that run in sublinear time for analyzing the cluster structure of the graph are receiving growing interest. Two typical examples are local graph clustering algorithms that…

Data Structures and Algorithms · Computer Science 2019-04-23 Pan Peng

Graph clustering has many important applications in computing, but due to growing sizes of graphs, even traditionally fast clustering methods such as spectral partitioning can be computationally expensive for real-world graphs of interest.…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-06-11 Julian Shun , Farbod Roosta-Khorasani , Kimon Fountoulakis , Michael W. Mahoney

Clustering is a commonplace problem in many areas of data science, with applications in biology and bioinformatics, understanding chemical structure, image segmentation, building recommender systems, and many more fields. While there are…

Numerical Analysis · Mathematics 2023-12-25 Tareq Zaman , Nicolas Nytko , Ali Taghibakhshi , Scott MacLachlan , Luke Olson , Matthew West

Cut-based directed graph (digraph) clustering often focuses on finding dense within-cluster or sparse between-cluster connections, similar to cut-based undirected graph clustering methods. In contrast, for flow-based clusterings the edges…

Machine Learning · Computer Science 2022-03-04 Koby Hayashi , Sinan G. Aksoy , Haesun Park
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