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Mapper algorithm can be used to build graph-based representations of high-dimensional data capturing structurally interesting features such as loops, flares or clusters. The graph can be further annotated with additional colouring of…

Numerical Analysis · Mathematics 2020-12-04 Ciara Frances Loughrey , Nick Orr , Anna Jurek-Loughrey , Paweł Dłotko

In the Graph Isomorphism problem two N-vertex graphs G and G' are given and the task is to determine whether there exists a permutation of the vertices of G that preserves adjacency and transforms G into G'. If yes, then G and G' are said…

Quantum Physics · Physics 2014-03-03 Frank Gaitan , Lane Clark

Graphs are nowadays ubiquitous in the fields of signal processing and machine learning. As a tool used to express relationships between objects, graphs can be deployed to various ends: I) clustering of vertices, II) semi-supervised…

Machine Learning · Computer Science 2020-07-17 Carlos Lassance , Vincent Gripon , Gonzalo Mateos

In this work we produce a framework for constructing universal function approximators on graph isomorphism classes. We prove how this framework comes with a collection of theoretically desirable properties and enables novel analysis. We…

Data Structures and Algorithms · Computer Science 2020-10-27 Rickard Brüel-Gabrielsson

Assume that there is a free group action of automorphisms on a bipartite graph. If there is a perfect matching on the factor graph, then obviously there is a perfect matching on the graph. Surprisingly, the reversed is also true for…

Group Theory · Mathematics 2016-07-26 Jan Fricke

Graph isomorphism is an important problem as its worst-case time complexity is not yet fully understood. In this study, we try to draw parallels between a related optimization problem called point set registration. A graph can be…

Optimization and Control · Mathematics 2021-11-19 Yigit Oktar

An isomorphism between two graphs is a bijection between their vertices that preserves the edges. We consider the problem of determining whether two finite undirected weighted graphs are isomorphic, and finding an isomorphism relating them…

Optimization and Control · Mathematics 2016-11-03 Reza Takapoui , Stephen Boyd

The rise of graph analytic systems has created a need for ways to measure and compare the capabilities of these systems. Graph analytics present unique scalability difficulties. The machine learning, high performance computing, and visual…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-03-07 Siddharth Samsi , Vijay Gadepally , Michael Hurley , Michael Jones , Edward Kao , Sanjeev Mohindra , Paul Monticciolo , Albert Reuther , Steven Smith , William Song , Diane Staheli , Jeremy Kepner

Node-link diagrams are a popular method for representing graphs that capture relationships between individuals, businesses, proteins, and telecommunication endpoints. However, node-link diagrams may fail to convey insights regarding graph…

Social and Information Networks · Computer Science 2023-09-20 Paul Rosen , Mustafa Hajij , Bei Wang

Many applications, ranging from natural to social sciences, rely on graphlet analysis for the intuitive and meaningful characterization of networks employing micro-level structures as building blocks. However, it has not been thoroughly…

Social and Information Networks · Computer Science 2023-06-06 Colin Cleveland , Chin-Yen Lee , Shen-Fu Tsai , Wei-Hsuan Yu , Hsuan-Wei Lee

Computational topology is an area that revisits topological problems from an algorithmic point of view, and develops topological tools for improved algorithms. We survey results in computational topology that are concerned with graphs drawn…

Computational Geometry · Computer Science 2017-09-06 Éric Colin de Verdière

Beyond-planarity focuses on combinatorial properties of classes of non-planar graphs that allow for representations satisfying certain local geometric or topological constraints on their edge crossings. Beside the study of a specific graph…

Data Structures and Algorithms · Computer Science 2019-08-27 Patrizio Angelini , Michael A. Bekos , Michael Kaufmann , Thomas Schneck

Let $G$ be a graph on $n$ vertices with adjacency matrix $A$, and let $\mathbf{1}$ be the all-ones vector. We call $G$ controllable if the set of vectors $\mathbf{1}, A\mathbf{1}, \dots, A^{n-1}\mathbf{1}$ spans the whole space…

Combinatorics · Mathematics 2023-09-12 Aida Abiad , Anuj Dawar , Octavio Zapata

The criteria for determining graph isomorphism are crucial for solving graph isomorphism problems. The necessary condition is that two isomorphic graphs possess invariants, but their function can only be used to filtrate and subdivide…

Graphics · Computer Science 2025-08-19 Chuanfu Hu , Aimin Hou

We solve the subgraph isomorphism problem in planar graphs in linear time, for any pattern of constant size. Our results are based on a technique of partitioning the planar graph into pieces of small tree-width, and applying dynamic…

Data Structures and Algorithms · Computer Science 2007-05-23 David Eppstein

In the $(G,H)$-isomorphism game, a verifier interacts with two non-communicating players (called provers) by privately sending each of them a random vertex from either $G$ or $H$, whose aim is to convince the verifier that two graphs $G$…

Combinatorics · Mathematics 2020-04-24 Laura Mančinska , David E. Roberson , Antonios Varvitsiotis

To determine that two given undirected graphs are isomorphic, we construct for them auxiliary graphs, using the breadth-first search. This makes capability to position vertices in each digraph with respect to each other. If the given graphs…

Data Structures and Algorithms · Computer Science 2018-02-13 Anatoly D. Plotnikov

The graph isomorphism (GI) problem is the computational problem of finding a permutation of vertices of a given graph $G_1$ that transforms $G_1$ to another given graph $G_2$ and preserves the adjacency. In this work, we propose a quantum…

Quantum Physics · Physics 2019-01-23 Xi Li , Hanwu Chen

IC-planar graphs are those graphs that admit a drawing where no two crossed edges share an end-vertex and each edge is crossed at most once. They are a proper subfamily of the 1-planar graphs. Given an embedded IC-planar graph $G$ with $n$…

Computational Geometry · Computer Science 2016-07-19 Franz J. Brandenburg , Walter Didimo , William S. Evans , Philipp Kindermann , Giuseppe Liotta , Fabrizio Montecchiani

Mapper and Ball Mapper are Topological Data Analysis tools used for exploring high dimensional point clouds and visualizing scalar-valued functions on those point clouds. Inspired by open questions in knot theory, new features are added to…

Algebraic Topology · Mathematics 2023-03-29 Paweł Dłotko , Davide Gurnari , Radmila Sazdanovic