Related papers: Dimer face polynomials in knot theory and cluster …

We give a combinatorial model for F-polynomials and g-vectors for type D cluster algebras where the associated quiver is acyclic. Our model utilizes a combination of dimer configurations and double dimer configurations which we refer to as…

Cluster algebra structures for Grassmannians and their (open) positroid strata are controlled by a Postnikov diagram D or, equivalently, a dimer model on the disc, as encoded by either a bipartite graph or the dual quiver (with faces). The…

We establish a connection between knot theory and cluster algebras via representation theory. To every knot diagram (or link diagram), we associate a cluster algebra by constructing a quiver with potential. The rank of the cluster algebra…

To every knot (or link) diagram K, we associate a cluster algebra A that contains a cluster x with the property that every cluster variable in x specializes to the Alexander polynomial of K. We call x the knot cluster of A. Furthermore,…

The combinatorial mutation of polygons, which transforms a given lattice polygon into another one, is an important operation to understand mirror partners for two-dimensional Fano manifolds, and the mutation-equivalent polygons give…

This is a sequel to the second and third author's Mixed Dimer Configuration Model in Type $D$ Cluster Algebras where we extend our model to work for quivers that contain oriented cycles. Namely, we extend a combinatorial model for…

Let alpha = (a,b,...) be a composition. Consider the associated poset F(alpha), called a fence, whose covering relations are x_1 < x_2 < ... < x_{a+1} > x_{a+2} > ... > x_{a+b+1} < x_{a+b+2} < ... . We study the associated distributive…

We prove a simple formula for arbitrary cluster variables in the marked surfaces model. As part of the formula, we associate a labeled poset to each tagged arc, such that the associated $F$-polynomial is a weighted sum of order ideals. Each…

A dimer model is a quiver with faces embedded into a disk. A consistent dimer model gives rise to a strand diagram, and hence to a positroid. The Gorenstein-projective module category over the completed boundary algebra of a dimer model was…

We introduce the tropical $F$-polynomial $f_M$ of a quiver representation $M$. We study its interplay with the general presentation for any finite-dimensional basic algebra. We give an interpretation of evaluating $f_M$ at a weight vector.…

We study a new class of quiver algebras on surfaces, called 'geodesic ghor algebras'. These algebras generalize cancellative dimer algebras on a torus to higher genus surfaces, where the relations come from perfect matchings rather than a…

Let $G$ be a graph embedded in a surface and let $\mathcal F$ be a set of even faces of $G$ (faces bounded by a cycle of even length). The resonance graph of $G$ with respect to $\mathcal F$, denoted by $R(G;\mathcal F)$, is a graph such…

Snake graphs are a class of planar graphs that are important in the theory of cluster algebras. Indeed, the Laurent expansions of the cluster variables in cluster algebras from surfaces are given as weight generating functions for 1-dimer…

We continue the study of quivers with potentials and their representations initiated in the first paper of the series. Here we develop some applications of this theory to cluster algebras. As shown in the "Cluster algebras IV" paper, the…

We prove that the class of cluster integrable systems constructed by Goncharov and Kenyon out of the dimer model on a torus coincides with the one defined by Gekhtman, Shapiro, Tabachnikov, and Vainshtein using Postnikov's perfect networks.…

We study the perfect matching lattice of a matching covered graph $G$, generated by the incidence vectors of its perfect matchings. Building on results of Lov\'asz and de Carvalho, Lucchesi, and Murty, we give a polynomial-time algorithm…

Let $G$ be a simple graph of order $n$. The domination polynomial of $G$ is the polynomial $D(G, x)=\sum_{i=1}^n d(G,i) x^i$, where $d(G,i)$ is the number of dominating sets of $G$ of size $i$. For two graphs $G$ and $H$, let $\mathcal{C} =…

This is a contribution to the number theory of the dimer problem. The number of dimer coverings (i.e., perfect matchings) of a square lattice graph is discussed modulo powers of 2.

We prove that the rank polynomial of the lattice of order ideals of a loop fence poset is unimodal. This poset arises as the poset of join-irreducibles in the lattice of good matchings of loop graphs associated with notched arcs.…

We introduce a class of links whose bracket polynomials admit an expansion over perfect matchings of a plane bipartite graph. This class includes 2-bridge links, pretzel links, and Montesinos links. Our first main result (Theorem A)…