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Active systems of self-propelled agents, e.g., birds, fish, and bacteria, can organize their collective motion into myriad autonomous behaviors. Ubiquitous in nature and across length scales, such phenomena are also amenable to artificial…

Soft Condensed Matter · Physics 2024-04-17 Yuchen Xi , Trevor J. Jones , Richard Huang , Tom Marzin , P. -T. Brun

Current artificial intelligence systems show near-human-level capabilities when deployed in isolation. Systems of a few collaborating intelligent agents are being engineered to perform tasks collectively. This raises the question of whether…

Soft Condensed Matter · Physics 2025-10-08 Onurcan Bektas , Adolfo Alsina , Steffen Rulands

We investigate emergence of spontaneous filtering of Brownian motion in higher dimensional space by many--body structures of symmetry broken dimer. Interacting dimer form structures which eventually restrict rotational degrees of freedom of…

Statistical Mechanics · Physics 2023-08-16 Mayank Sharma , A. Bhattacharyay

Predicting single-cell perturbation outcomes directly advances gene function analysis and facilitates drug candidate selection, making it a key driver of both basic and translational biomedical research. However, a major bottleneck in this…

Machine Learning · Computer Science 2025-11-18 Changxi Chi , Yufei Huang , Jun Xia , Jiangbin Zheng , Yunfan Liu , Zelin Zang , Stan Z. Li

Active particles with their characteristic feature of self-propulsion are regarded as the simplest models for motility in living systems. The accumulation of active particles in low activity regions has led to the general belief that…

Soft Condensed Matter · Physics 2021-05-26 Hidde D. Vuijk , Holger Merlitz , Michael Lang , Abhinav Sharma , Jens-Uwe Sommer

There has been a long debate on how new levels of organization have evolved. It might seem unlikely, as cooperation must prevail over competition. One well-studied example is the emergence of autocatalytic sets, which seem to be a…

Populations and Evolution · Quantitative Biology 2026-02-16 Sean P. Maley , Carlos Gershenson , Stuart A. Kauffman

Paratrechina longicornis ants are known for their ability to cooperatively transport large food items. Previous studies have focused on the behavioral rules of individual ants and explained the efficient coordination using the…

Biological Physics · Physics 2024-02-27 Tabea Heckenthaler , Tobias Holder , Ariel Amir , Ofer Feinerman , Ehud Fonio

One common feature of a vehicle, an ant and a kinesin motor is that they all convert chemical energy, derived from fuel or food, into mechanical energy required for their forward movement; such objects have been modelled in recent years as…

Statistical Mechanics · Physics 2009-11-10 Debashish Chowdhury

An important characteristic of flocks of birds, school of fish, and many similar assemblies of self-propelled particles is the emergence of states of collective order in which the particles move in the same direction. When noise is added…

Statistical Mechanics · Physics 2015-01-19 M. Aldana , V. Dossetti , C. Huepe , V. M. Kenkre , H. Larralde

We study a simple swarming model on a two-dimensional lattice where the self-propelled particles exhibit a tendency to align ferromagnetically. Volume exclusion effects are present: particles can only hop to a neighboring node if the node…

Biological Physics · Physics 2013-02-18 Fernando Peruani , Tobias Klauss , Andreas Deutsch , Anja Voss-Boehme

We suggest that ensembles of self-replicating entities such as biological systems naturally evolve into a self-organized critical state in which fluctuations, as well as waiting-times between phase transitions are distributed according to a…

adap-org · Physics 2009-10-22 C. Adami

Systems comprised of self-steering active Brownian particles are studied via simulations for a minimal cognitive flocking model. The dynamics of the active Brownian particles is extended by an orientational response with limited…

Soft Condensed Matter · Physics 2024-06-04 Rajendra Singh Negi , Roland G. Winkler , Gerhard Gompper

We investigate active particles that exhibit long-range interactions only restricted by a field of view, which is characterized by an angle $\beta$. We show that constraining attractive interactions to a field of view leads to the emergence…

Biological Physics · Physics 2026-04-03 Edgardo Brigatti , Fernando Peruani

We model and study the patterns created through the interaction of collectively moving self-propelled particles (SPPs) and elastically tethered obstacles. Simulations of an individual-based model reveal at least three distinct large-scale…

Computational models of collective behavior in birds has allowed us to infer interaction rules directly from experimental data. Using a generic form of these rules we explore the collective behavior and emergent dynamics of a simulated…

Adaptation and Self-Organizing Systems · Physics 2012-07-24 Michael Small , Xiaoke Xu

In this paper, we introduce a one-dimensional model of particles performing independent random walks, where only pairs of particles can produce offspring ("cooperative branching"), and particles that land on an occupied site merge with the…

Probability · Mathematics 2015-05-29 Anja Sturm , Jan M. Swart

Bacteria frequently colonize natural microcavities such as gut crypts, plant apoplasts, and soil pores. Recent studies have shown that the physical structure of these spaces plays a crucial role in shaping the stability and resilience of…

Populations and Evolution · Quantitative Biology 2025-03-28 Valentin Slepukhin , Víctor Peris Yagüe , Christian Westendorf , Birgit Koch , Oskar Hallatschek

We study a generalization of the Brownian bridge as a stochastic process that models the position and velocity of inertial particles between the two end-points of a time interval. The particles experience random acceleration and are assumed…

Systems and Control · Computer Science 2014-07-15 Yongxin Chen , Tryphon Georgiou

Complex spatial patterns in biological systems often arise through self-organization without a central coordination, guided by local interactions and chemical signaling. In this study, we explore how motility-dependent chemical deposition…

Biological Physics · Physics 2025-04-24 Subhashree Subhrasmita Khuntia , Debasish Chaudhuri , Abhishek Chaudhuri

A simple periodically driven system displaying rich behavior is introduced and studied. The system self-organizes into a mosaic of static ordered regions with three possible patterns, which are threaded by one-dimensional paths on which a…

Statistical Mechanics · Physics 2015-03-24 Daniel Hexner , Dov Levine