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Related papers: Differentiating Three-Dimensional Molecular Struct…

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We report on the first detailed analysis of large three dimensional (3D) complex plasma structures in experiments performed in pure rf and combined rf+dc discharge modes. Inductively coupled plasma (ICP) is generated by an rf coil wrapped…

Plasma Physics · Physics 2013-04-04 S. Mitic , B. A. Klumov , S. A. Khrapak , G. E. Morfill

Matrix-Assisted Laser Desorption/Ionisation Mass Spectrometry Imaging (MSI) is a powerful technique for spatially resolved molecular profiling and cancer biomarker discovery. Recent advances, including a novel multiomics workflow, enable…

Methodology · Statistics 2025-09-03 Francesco Denti , Cecilia Balocchi , Vanna Denti , Giulia Capitoli

Discovering the 3D atomic structure of molecules such as proteins and viruses is a fundamental research problem in biology and medicine. Electron Cryomicroscopy (Cryo-EM) is a promising vision-based technique for structure estimation which…

Computer Vision and Pattern Recognition · Computer Science 2016-11-18 Marcus A. Brubaker , Ali Punjani , David J. Fleet

We investigate dissociation reactions of loosely bound and spatially extended three-body systems. We formulate a practical method for simultaneous treatment of long-range Coulomb and short-range nuclear interactions. We use $^6$He…

Nuclear Theory · Physics 2009-11-06 E. Garrido , D. V. Fedorov , A. S. Jensen

Based on the eigenvector continuation, which is mathematically an instance of the reduced basis method (RBM), we construct an emulator for coupled-channels calculations for heavy-ion fusion reactions at energies around the Coulomb barrier.…

Nuclear Theory · Physics 2026-03-23 Zehong Liao , K. Hagino , Long Zhu , S. Yoshida , K. Uzawa

We formulate a general three-dimensional semiclassical model for the study of correlated multielectron escape during fragmentation of molecules driven by intense infrared laser pulses, while fully accounting for the magnetic field of the…

Atomic Physics · Physics 2023-11-30 Georgios Petros Katsoulis , Matthew Benjamin Peters , Agapi Emmanouilidou

Cryogenic electron microscopy (cryo-EM) provides images from different copies of the same biomolecule in arbitrary orientations. Here, we present an end-to-end unsupervised approach that learns individual particle orientations from cryo-EM…

Image and Video Processing · Electrical Eng. & Systems 2021-07-08 Youssef S. G. Nashed , Frederic Poitevin , Harshit Gupta , Geoffrey Woollard , Michael Kagan , Chuck Yoon , Daniel Ratner

Cryo-Electron Microscopy (Cryo-EM) is a Nobel prize-winning technology for determining the 3D structure of particles at near-atomic resolution. A fundamental step in the recovering of the 3D single-particle structure is to align its 2D…

Image and Video Processing · Electrical Eng. & Systems 2021-01-12 Koby Bibas , Gili Weiss-Dicker , Dana Cohen , Noa Cahan , Hayit Greenspan

We formulate a three-dimensional semi-classical model to address triple and double ionization in three-electron atoms driven by intense infrared laser pulses. During time propagation, our model fully accounts for the Coulomb singularities,…

Atomic Physics · Physics 2022-04-20 M. B. Peters , G. P. Katsoulis , A. Emmanouilidou

A moderately intense $450$ fs laser pulse is used to create rotational wave packets in gas phase $\rm{I_2}$ molecules. The ensuing time-dependent alignment, measured by Coulomb explosion imaging with a delayed probe pulse, exhibits the…

We present a channel-resolved interpretation of laser-driven Coulomb explosion of the HCl dimer from an ensemble of trajectories. Three dominant outcomes are identified: a minor three-body channel and two four-body channels (sequential and…

Chemical Physics · Physics 2026-01-21 Chen Jiang , Cody L. Covington , Kalman Varga

The filamentary structures and associated electromagnetic fields of a relativistic electron beam have been studied by three dimensional particle-in-cell (PIC) simulations in the context of Fast Ignition fusion. The simulations explicitly…

Plasma Physics · Physics 2009-11-13 Anupam Karmakar , Naveen Kumar , Oleg Polomarov , Gennady Shvets , Alexander Pukhov

We image the micro-electroluminescence (EL) spectra of self-assembled InAs quantum dots (QDs) embedded in the intrinsic region of a GaAs p-i-n diode and demonstrate optical detection of resonant carrier injection into a single QD. Resonant…

Mesoscale and Nanoscale Physics · Physics 2010-12-15 A. Baumgartner , E. Stock , A. Patanè , L. Eaves , M. Henini , D. Bimberg

In the context of calling for low carbon emissions, lithium-ion batteries (LIBs) have been widely concerned as a power source for electric vehicles, so the fundamental science behind their manufacturing has attracted much attention in…

Background: Breakup reactions are often used to probe the nuclear structure of halo nuclei. The eikonal model diverges for Coulomb breakup since it relies on the adiabatic approximation. To correct this weakness, a Coulomb-corrected eikonal…

Nuclear Theory · Physics 2020-06-24 Chloë Hebborn , Daniel Baye

Using the frequency-domain theory, the high-order above threshold ionization (HATI) of a molecule is treated as a two-step transition: an above threshold ionization (ATI) followed by a laser-assisted collision (LAC). It is found that the…

Atomic Physics · Physics 2009-05-28 Bingbing Wang , Yingchun Guo , Zong-Chao Yan , Panming Fu

Constructing of molecular structural models from Cryo-Electron Microscopy (Cryo-EM) density volumes is the critical last step of structure determination by Cryo-EM technologies. Methods have evolved from manual construction by structural…

Machine Learning · Computer Science 2019-02-13 Kui Xu , Zhe Wang , Jiangping Shi , Hongsheng Li , Qiangfeng Cliff Zhang

We have measured magneto-optical signals obtained by exciting the $D_1$ line of cesium atoms confined to an extremely thin cell (ETC), whose walls are separated by less than one micrometer, and developed an improved theoretical model to…

Atomic Physics · Physics 2015-03-05 M. Auzinsh , A. Berzins , R. Ferber , F. Gahbauer , U. Kalnins , L. Kalvans , R. Rundans , D. Sarkisyan

Random impedance networks are widely used as a model to describe plasmon resonances in disordered metal-dielectric nanocomposites. In order to study thin films, two-dimensional networks are often used despite the fact that such networks…

Mesoscale and Nanoscale Physics · Physics 2018-11-06 Nikita Olekhno , Yaroslav Beltukov

We investigate the three-body Coulomb breakup of a two-neutron halo nucleus $^{11}$Li. We use the coupled-channel $^9$Li + $n$ + $n$ three-body model, which includes the coupling between last neutron states and the various $2p$-$2h$…

Nuclear Theory · Physics 2013-03-08 Yuma Kikuchi , Takayuki Myo , Kiyoshi Kato , Kiyomi Ikeda