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We tackle biomedical image segmentation in the scenario of only a few labeled brain MR images. This is an important and challenging task in medical applications, where manual annotations are time-consuming. Current multi-atlas based…

Computer Vision and Pattern Recognition · Computer Science 2020-01-14 Hyeon Woo Lee , Mert R. Sabuncu , Adrian V. Dalca

The task of automatically segmenting 3-D surfaces representing boundaries of objects is important for quantitative analysis of volumetric images, and plays a vital role in biomedical image analysis. Recently, graph-based methods with a…

Computer Vision and Pattern Recognition · Computer Science 2018-01-10 Abhay Shah , Michael Abramoff , Xiaodong Wu

Deep learning architectures based on convolutional neural networks tend to rely on continuous, smooth features. While this characteristics provides significant robustness and proves useful in many real-world tasks, it is strikingly…

Computer Vision and Pattern Recognition · Computer Science 2026-03-10 Zuzanna Buchnajzer , Kacper Dobek , Stanisław Hapke , Daniel Jankowski , Krzysztof Krawiec

Robust and highly accurate lung segmentation in X-rays is crucial in medical imaging. This study evaluates deep learning solutions for this task, ranking existing methods and analyzing their performance under diverse image modifications.…

Image and Video Processing · Electrical Eng. & Systems 2024-09-09 Weronika Hryniewska-Guzik , Jakub Bilski , Bartosz Chrostowski , Jakub Drak Sbahi , Przemysław Biecek

Automated detection of curvilinear structures, e.g., blood vessels or nerve fibres, from medical and biomedical images is a crucial early step in automatic image interpretation associated to the management of many diseases. Precise…

Image and Video Processing · Electrical Eng. & Systems 2020-10-20 Lei Mou , Yitian Zhao , Huazhu Fu , Yonghuai Liu , Jun Cheng , Yalin Zheng , Pan Su , Jianlong Yang , Li Chen , Alejandro F Frang , Masahiro Akiba , Jiang Liu

Biomedical image segmentation plays a central role in quantitative analysis, clinical diagnosis, and medical intervention. In the light of the fully convolutional networks (FCN) and U-Net, deep convolutional networks (DNNs) have made…

Computer Vision and Pattern Recognition · Computer Science 2024-03-19 Jiawei Zhang , Yuzhen Jin , Jilan Xu , Xiaowei Xu , Yanchun Zhang

This paper presents a new framework for human body part segmentation based on Deep Convolutional Neural Networks trained using only synthetic data. The proposed approach achieves cutting-edge results without the need of training the models…

Computer Vision and Pattern Recognition · Computer Science 2022-06-08 Alessandro Saviolo , Matteo Bonotto , Daniele Evangelista , Marco Imperoli , Jacopo Lazzaro , Emanuele Menegatti , Alberto Pretto

Our work expands the use of capsule networks to the task of object segmentation for the first time in the literature. This is made possible via the introduction of locally-constrained routing and transformation matrix sharing, which reduces…

Image and Video Processing · Electrical Eng. & Systems 2020-12-14 Rodney LaLonde , Ziyue Xu , Ismail Irmakci , Sanjay Jain , Ulas Bagci

In the field of pattern recognition research, the method of using deep neural networks based on improved computing hardware recently attracted attention because of their superior accuracy compared to conventional methods. Deep neural…

Computer Vision and Pattern Recognition · Computer Science 2018-09-27 Kyongsik Yun , Alexander Huyen , Thomas Lu

Biomedical image segmentation plays a vital role in diagnosis of diseases across various organs. Deep learning-based object detection methods are commonly used for such segmentation. There exists an extensive research in this topic.…

Image and Video Processing · Electrical Eng. & Systems 2024-08-30 Fazli Wahid , Yingliang Ma , Dawar Khan , Muhammad Aamir , Syed U. K. Bukhari

Medical imaging refers to the technologies and methods utilized to view the human body and its inside, in order to diagnose, monitor, or even treat medical disorders. This paper aims to explore the application of deep learning techniques in…

Image and Video Processing · Electrical Eng. & Systems 2024-11-08 Ketan Suhaas Saichandran

Medical image segmentation has been very challenging due to the large variation of anatomy across different cases. Recent advances in deep learning frameworks have exhibited faster and more accurate performance in image segmentation. Among…

Image and Video Processing · Electrical Eng. & Systems 2020-03-12 Maryam Asadi-Aghbolaghi , Reza Azad , Mahmood Fathy , Sergio Escalera

Accurate segmentation of carotid artery structures in histopathological images is vital for cardiovascular disease research. This study systematically evaluates ten deep learning segmentation models including classical architectures, modern…

Computer Vision and Pattern Recognition · Computer Science 2026-04-07 Phongsakon Mark Konrad , Andrei-Alexandru Popa , Yaser Sabzehmeidani , Liang Zhong , Madhulika Tripathy , Andrei Constantinescu , Elisa A. Liehn , Serkan Ayvaz

Nowadays, machine and deep learning techniques are widely used in different areas, ranging from economics to biology. In general, these techniques can be used in two ways: trying to adapt well-known models and architectures to the available…

Machine Learning · Computer Science 2022-03-21 Danilo Avola , Marco Cascio , Luigi Cinque , Alessio Fagioli , Gian Luca Foresti , Marco Raoul Marini , Daniele Pannone

Skin cancer is a major public health problem that could benefit from computer-aided diagnosis to reduce the burden of this common disease. Skin lesion segmentation from images is an important step toward achieving this goal. However, the…

Image and Video Processing · Electrical Eng. & Systems 2023-06-21 Zahra Mirikharaji , Kumar Abhishek , Alceu Bissoto , Catarina Barata , Sandra Avila , Eduardo Valle , M. Emre Celebi , Ghassan Hamarneh

Deep learning (DL) based semantic segmentation methods have been providing state-of-the-art performance in the last few years. More specifically, these techniques have been successfully applied to medical image classification, segmentation,…

Computer Vision and Pattern Recognition · Computer Science 2018-05-30 Md Zahangir Alom , Mahmudul Hasan , Chris Yakopcic , Tarek M. Taha , Vijayan K. Asari

Convolutional neural networks are state-of-the-art for various segmentation tasks. While for 2D images these networks are also computationally efficient, 3D convolutions have huge storage requirements and therefore, end-to-end training is…

Computer Vision and Pattern Recognition · Computer Science 2022-02-01 Christoph Angermann , Markus Haltmeier

Recently deep learning has been playing a major role in the field of computer vision. One of its applications is the reduction of human judgment in the diagnosis of diseases. Especially, brain tumor diagnosis requires high accuracy, where…

Computer Vision and Pattern Recognition · Computer Science 2018-09-24 Zahra Sobhaninia , Safiyeh Rezaei , Alireza Noroozi , Mehdi Ahmadi , Hamidreza Zarrabi , Nader Karimi , Ali Emami , Shadrokh Samavi

This tutorial covers biomedical image reconstruction, from the foundational concepts of system modeling and direct reconstruction to modern sparsity and learning-based approaches. Imaging is a critical tool in biological research and…

Image and Video Processing · Electrical Eng. & Systems 2021-03-12 Michael T. McCann , Michael Unser

Convolutional neural networks like U-Net excel in medical image segmentation, while attention mechanisms and KAN enhance feature extraction. Meta's SAM 2 uses Vision Transformers for prompt-based segmentation without fine-tuning. However,…

Image and Video Processing · Electrical Eng. & Systems 2025-04-08 Mengyuan Liu , Yixiao Chen , Anning Tian , Xinmeng Wu , Mozhi Shen , Tianchou Gong , Jeongkyu Lee