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Atomistic simulations are used to study the bending of rectangular graphene nano ribbons subjected to axial stress both for free boundary and supported boundary conditions. The shape of the deformations of the buckled graphene nano ribbons,…

Mesoscale and Nanoscale Physics · Physics 2015-05-27 M. Neek-Amal , F. M. Peeters

Network models are used as efficient representation of materials with complex, interconnected locally one-dimensional structures. They typically accurately capture the mechanical properties of a material, while substantially reducing…

Numerical Analysis · Mathematics 2025-12-16 Morgan Görtz , Moritz Hauck , Axel Målqvist , Andreas Rupp , Lucia Swoboda

Many organisms have an elastic skeleton that consists of a closed shell of epithelial cells that is filled with fluid, and can actively regulate both elastic forces in the shell and hydrostatic pressure inside it. In this work we introduce…

Soft Condensed Matter · Physics 2023-10-13 Ajoy Maji , Yitzhak Rabin

The impressive lifelong learning in animal brains is primarily enabled by plastic changes in synaptic connectivity. Importantly, these changes are not passive, but are actively controlled by neuromodulation, which is itself under the…

Neural and Evolutionary Computing · Computer Science 2021-07-06 Thomas Miconi , Aditya Rawal , Jeff Clune , Kenneth O. Stanley

We study the structural and dynamical behaviors of a diblock copolymer chain in a bath of active Brownian particles (ABPs) by extensive Brownian dynamics simulation in a two-dimensional model system. Specifically, the A block of chain is…

Soft Condensed Matter · Physics 2019-05-22 Yi-qi Xia , Zhuang-lin Shen , Wen-de Tian , Kang Chen , Yu-qiang Ma

A coarse-grained computational model is used to investigate how the bending rigidity of a polymer under tension affects the formation of a trefoil knot. Thermodynamic integration techniques are applied to demonstrate that the free-energy…

Soft Condensed Matter · Physics 2012-11-13 Richard Matthews , Ard A. Louis , Christos N. Likos

By using the blob theory and computer simulations, we investigate the properties of a linear polymer performing a stationary rotational motion around a long impenetrable rod. In particular, in the simulations the rotation is induced by a…

In this work, we compare the structural and dynamic behavior of active filaments in two dimensions using tangential and push-pull models, including a variant with passive end monomers. These models serve as valuable frameworks for…

We investigate the mechanics of two asymmetric ribbons bound at one end and pulled apart at the other ends. We characterize the elastic junction near the bonding and conceptualize it as a bending boundary layer. While the size of this…

Soft Condensed Matter · Physics 2025-02-12 Nathan Vani , Alejandro Ibarra , José Bico , Étienne Reyssat , Benoît Roman

A theoretical and experimental investigation is presented on the intermodal coupling between the flexural vibration modes of a single clamped-clamped beam. Nonlinear coupling allows an arbitrary flexural mode to be used as a self-detector…

Mesoscale and Nanoscale Physics · Physics 2010-09-14 H. J. R. Westra , M. Poot , H. S. J. van der Zant , W. J. Venstra

Geometric and structural constraints greatly restrict the selection of folds adapted by protein backbones, and yet, folded proteins show an astounding diversity in functionality. For structure to have any bearing on function, it is thus…

Biological Physics · Physics 2010-04-20 Brinda K. V. , Saraswathi Vishveshwara , Smitha Vishveshwara

Accurate manipulation of a deformable body such as a piece of fabric is difficult because of its many degrees of freedom and unobservable properties affecting its dynamics. To alleviate these challenges, we propose the application of…

Robotics · Computer Science 2019-04-03 Vladimír Petrík , Ville Kyrki

To go beyond the simple model for the fold as two flexible surfaces or faces linked by a crease that behaves as an elastic hinge, we carefully shape and anneal a crease within a polymer sheet and study its mechanical response. First, we…

Soft Condensed Matter · Physics 2018-08-16 Théo Jules , Frédéric Lechenault , Mokhtar Adda-Bedia

Understanding and mitigating the failure of reinforced elastomers has been a long-standing challenge in many industrial applications. In an early attempt to shed light on the fundamental mechanisms of failure, Gent and Park presented a…

Soft Condensed Matter · Physics 2025-11-26 Xuanhe Li , Brendan Unikewicz , S. Chockalingam , Hudson Borja da Rocha , Tal Cohen

Inspired by the ubiquity of composite filamentous networks in nature we investigate models of biopolymer networks that consist of interconnected floppy and stiff filaments. Numerical simulations carried out in three dimensions allow us to…

Biomolecules · Quantitative Biology 2015-05-19 Elisabeth M. Huisman , Claus Heussinger , Cornelis Storm , Gerard T. Barkema

Active polymers are driven out of equilibrium by internal forces and exhibit conformational properties that differ fundamentally from those of passive chains. Here we study how spatially modulated tangential activity reshapes the…

Soft Condensed Matter · Physics 2025-12-17 Paolo Malgaretti , Emanuele Locatelli

Active materials are capable of converting free energy into directional motion, giving rise to striking dynamical phenomena. Developing a general understanding of their structure in relation to the underlying non-equilibrium physics would…

Soft Condensed Matter · Physics 2018-10-17 Nitin Kumar , Rui Zhang , Juan J. de Pablo , Margaret L. Gardel

We report extensive numerical simulations of different models of 2D polymer rings with internal elasticity. We monitor the dynamical behavior of the rings as a function of the packing fraction, to address the effects of particle deformation…

Soft Condensed Matter · Physics 2021-06-07 Nicoletta Gnan , Fabrizio Camerin , Giovanni Del Monte , Andrea Ninarello , Emanuela Zaccarelli

How can we build agents that keep learning from experience, quickly and efficiently, after their initial training? Here we take inspiration from the main mechanism of learning in biological brains: synaptic plasticity, carefully tuned by…

Neural and Evolutionary Computing · Computer Science 2018-08-01 Thomas Miconi , Jeff Clune , Kenneth O. Stanley

We theoretically study a doped graphene ribbon suspended over a trench and subject to an ac-electrical field polarized perpendicularly to the graphene plane. In such a system, the external ac-field is coupled to the relatively slow…

Mesoscale and Nanoscale Physics · Physics 2015-06-12 Axel M. Eriksson , Leonid Y. Gorelik