Related papers: Gradient flow dynamics for cell membranes in the C…
In this paper, we develop a phase-field model for binary incompressible (quasi-incompressible) fluid with thermocapillary effects, which allows for the different properties (densities, viscosities and heat conductivities) of each component…
The interfacial diffusion associated with finite volume method (FVM) discretizations of multiphase flows creates the need for an interface sharpening mechanism. Such solutions for structured quadrilateral grids are well documented, but…
The elastic flow, which is the $L^2$-gradient flow of the elastic energy, has several applications in geometry and elasticity theory. We present stable discretizations for the elastic flow in two-dimensional Riemannian manifolds that are…
The deformation of cellular membranes regulates trafficking processes, such as exocytosis and endocytosis. Classically, the Helfrich continuum model is used to characterize the forces and mechanical parameters that cells tune to accomplish…
An algorithm for simulating self-gravitating cosmological astrophysical fluids is presented. The advantages include a large dynamic range, parallelizability, high resolution per grid element and fast execution speed. The code is based on a…
The mean curvature flow describes the parabolic deformation of embedded branes in Riemannian geometry driven by their extrinsic mean curvature vector, which is typically associated to surface tension forces. It is the gradient flow of the…
Variational principles are developed within the framework of a spinor representation of the surface geometry to examine the equilibrium properties of a membrane or interface. This is a far-reaching generalization of the Weierstrass-Enneper…
The immersed boundary method is a mathematical formulation and numerical method for solving fluid-structure interaction problems. For many biological problems, such as models that include the cell membrane, the immersed structure is a…
A novel numerical strategy is introduced for computing approximations of solutions to a Cahn-Hilliard model with degenerate mobilities. This model has recently been introduced as a second-order phase-field approximation for surface…
In this paper, a gradient flow model is proposed for conducting ground state calculations in Wigner formalism of many-body system in the framework of density functional theory. More specifically, an energy functional for the ground state in…
We consider shape and topology optimization for fluids which are governed by the Navier--Stokes equations. Shapes are modelled with the help of a phase field approach and the solid body is relaxed to be a porous medium. The phase field…
Chiral active fluids consist of self-spinning particles that rotate as a result of a continuous injection of energy on the microscopic scale (e.g., by activity or an external field). The hydrodynamics of such fluids is described by…
We prove a quantitative reverse isoperimetric inequality for embedded surfaces with Willmore energy bounded away from $8\pi$. We use this result to analyze the negative $L^2$ gradient flow of the Willmore energy plus a positive multiple of…
We study both the local and global existence of a gradient flow of the Sinai-Ruelle-Bowen entropy functional on a Hilbert manifold of expanding maps of a circle equipped with a Sobolev norm in the tangent space of the manifold. We show…
Gradient-flow (GF) viewpoints unify and illuminate optimization algorithms, yet most GF analyses focus on unconstrained settings. We develop a geometry-respecting framework for constrained problems by (i) reparameterizing feasible sets with…
Accurate simulations of flows in stellar interiors are crucial to improving our understanding of stellar structure and evolution. Because the typically slow flows are merely tiny perturbations on top of a close balance between gravity and…
A thermodynamically consistent phase-field model is introduced for simulating multicellular deformation, and aggregation under flow conditions. In particular, a Lennard-Jones type potential is proposed under the phase-field framework for…
We study a flow of $G_2$ structures which induce the same Riemannian metric which is the negative gradient flow of an energy functional. We prove Shi-type estimates for the torsion tensor along the flow. We show that at a finite-time…
A recurring obstacle in the study of Wasserstein gradient flow is the lack of convexity of the square Wasserstein metric. In this paper, we develop a class of transport metrics that have better convexity properties and use these metrics to…
The problem of deriving a gradient flow structure for the porous medium equation which is {\em thermodynamic}, in that it arises from the large deviations of some microscopic particle system, is studied. To this end, a rescaled zero-range…