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Spatial Transcriptomics (ST) is a technology that measures gene expression profiles within tissue sections while retaining spatial context. It reveals localized gene expression patterns and tissue heterogeneity, both of which are essential…

Quantitative Methods · Quantitative Biology 2026-03-24 Wei Zhang , Jiajun Chu , Xinci Liu , Chen Tong , Xinyue Li

Medical endoscopy remains a challenging application for simultaneous localization and mapping (SLAM) due to the sparsity of image features and size constraints that prevent direct depth-sensing. We present a SLAM approach that incorporates…

Image and Video Processing · Electrical Eng. & Systems 2019-07-02 Richard J. Chen , Taylor L. Bobrow , Thomas Athey , Faisal Mahmood , Nicholas J. Durr

Deep learning models have obtained state-of-the-art results for medical image analysis. However, when these models are tested on an unseen domain there is a significant performance degradation. In this work, we present an unsupervised…

Image and Video Processing · Electrical Eng. & Systems 2021-11-01 Maria Baldeon-Calisto , Susana K. Lai-Yuen

Unsupervised domain adaptation (UDA) has shown remarkable results in bearing fault diagnosis under changing working conditions in recent years. However, most UDA methods do not consider the geometric structure of the data. Furthermore, the…

Systems and Control · Electrical Eng. & Systems 2021-12-14 Mohammadreza Ghorvei , Mohammadreza Kavianpour , Mohammad TH Beheshti , Amin Ramezani

Deep convolutional neural networks trained end-to-end are the state-of-the-art methods to regress dense disparity maps from stereo pairs. These models, however, suffer from a notable decrease in accuracy when exposed to scenarios…

Computer Vision and Pattern Recognition · Computer Science 2019-04-08 Alessio Tonioni , Fabio Tosi , Matteo Poggi , Stefano Mattoccia , Luigi Di Stefano

Simultaneous modeling of the spatio-temporal variation patterns of brain functional network from 4D fMRI data has been an important yet challenging problem for the field of cognitive neuroscience and medical image analysis. Inspired by the…

Computer Vision and Pattern Recognition · Computer Science 2021-03-24 Yu Zhao , Xiang Li , Wei Zhang , Shijie Zhao , Milad Makkie , Mo Zhang , Quanzheng Li , Tianming Liu

Mammographic mass detection and segmentation are usually performed as serial and separate tasks, with segmentation often only performed on manually confirmed true positive detections in previous studies. We propose a fully-integrated…

Computer Vision and Pattern Recognition · Computer Science 2019-10-22 Hang Min , Devin Wilson , Yinhuang Huang , Siyu Liu , Stuart Crozier , Andrew P Bradley , Shekhar S. Chandra

We describe an adversarial learning approach to constrain convolutional neural network training for image registration, replacing heuristic smoothness measures of displacement fields often used in these tasks. Using minimally-invasive…

Our MATE is the first Test-Time-Training (TTT) method designed for 3D data, which makes deep networks trained for point cloud classification robust to distribution shifts occurring in test data. Like existing TTT methods from the 2D image…

Computer Vision and Pattern Recognition · Computer Science 2023-03-21 M. Jehanzeb Mirza , Inkyu Shin , Wei Lin , Andreas Schriebl , Kunyang Sun , Jaesung Choe , Horst Possegger , Mateusz Kozinski , In So Kweon , Kun-Jin Yoon , Horst Bischof

Dense depth estimation and 3D reconstruction of a surgical scene are crucial steps in computer assisted surgery. Recent work has shown that depth estimation from a stereo images pair could be solved with convolutional neural networks.…

Image and Video Processing · Electrical Eng. & Systems 2021-07-24 Baoru Huang , Jianqing Zheng , Anh Nguyen , David Tuch , Kunal Vyas , Stamatia Giannarou , Daniel S. Elson

There has been a concurrent significant improvement in the medical images used to facilitate diagnosis and the performance of machine learning techniques to perform tasks such as classification, detection, and segmentation in recent years.…

Computer Vision and Pattern Recognition · Computer Science 2022-12-22 Vinay Jogani , Joy Purohit , Ishaan Shivhare , Samina Attari , Shraddha Surtkar

Recent studies have focused on utilizing multi-modal data to develop robust models for facial Action Unit (AU) detection. However, the heterogeneity of multi-modal data poses challenges in learning effective representations. One such…

Computer Vision and Pattern Recognition · Computer Science 2023-08-24 Xiang Zhang , Huiyuan Yang , Taoyue Wang , Xiaotian Li , Lijun Yin

Contrastive learning has achieved great success in skeleton-based action recognition. However, most existing approaches encode the skeleton sequences as entangled spatiotemporal representations and confine the contrasts to the same level of…

Computer Vision and Pattern Recognition · Computer Science 2023-09-13 Cong Wu , Xiao-Jun Wu , Josef Kittler , Tianyang Xu , Sara Atito , Muhammad Awais , Zhenhua Feng

Open-set recognition and adversarial defense study two key aspects of deep learning that are vital for real-world deployment. The objective of open-set recognition is to identify samples from open-set classes during testing, while…

Computer Vision and Pattern Recognition · Computer Science 2022-02-15 Rui Shao , Pramuditha Perera , Pong C. Yuen , Vishal M. Patel

Advances in the realm of Generative Adversarial Networks (GANs) have led to architectures capable of producing amazingly realistic images such as StyleGAN2, which, when trained on the FFHQ dataset, generates images of human faces from…

Computer Vision and Pattern Recognition · Computer Science 2021-05-18 Mengyu Yang , David Rokeby , Xavier Snelgrove

Face presentation attack detection (PAD) has been an urgent problem to be solved in the face recognition systems. Conventional approaches usually assume the testing and training are within the same domain; as a result, they may not…

Computer Vision and Pattern Recognition · Computer Science 2020-04-07 Guoqing Wang , Hu Han , Shiguang Shan , Xilin Chen

Pathological anomalies exhibit diverse appearances in medical imaging, making it difficult to collect and annotate a representative amount of data required to train deep learning models in a supervised setting. Therefore, in this work, we…

Image and Video Processing · Electrical Eng. & Systems 2023-07-18 Mariana-Iuliana Georgescu

Purpose: Paranasal anomalies, frequently identified in routine radiological screenings, exhibit diverse morphological characteristics. Due to the diversity of anomalies, supervised learning methods require large labelled dataset exhibiting…

Self-supervised learning has proved effective for skeleton-based human action understanding. However, previous works either rely on contrastive learning that suffers false negative problems or are based on reconstruction that learns too…

Computer Vision and Pattern Recognition · Computer Science 2024-09-17 Lehong Wu , Lilang Lin , Jiahang Zhang , Yiyang Ma , Jiaying Liu

Unmasking the decision-making process of machine learning models is essential for implementing diagnostic support systems in clinical practice. Here, we demonstrate that adversarially trained models can significantly enhance the usability…