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Graphs are often used to model relationships between entities. The identification and visualization of clusters in graphs enable insight discovery in many application areas, such as life sciences and social sciences. Force-directed graph…

Human-Computer Interaction · Computer Science 2024-08-22 Nora Al-Naami , Nicolas Médoc , Matteo Magnani , Mohammad Ghoniem

We introduce a mapping between graphs and pure quantum bipartite states and show that the associated entanglement entropy conveys non-trivial information about the structure of the graph. Our primary goal is to investigate the family of…

Quantum Physics · Physics 2012-02-24 Silvano Garnerone , Paolo Giorda , Paolo Zanardi

Common experience suggests that many networks might possess community structure - division of vertices into groups, with a higher density of edges within groups than between them. Here we describe a new computer algorithm that detects…

Statistical Mechanics · Physics 2015-06-24 M. E. J. Newman , M. Girvan

Networks are a fundamental model of complex systems throughout the sciences, and network datasets are typically analyzed through lower-order connectivity patterns described at the level of individual nodes and edges. However, higher-order…

Social and Information Networks · Computer Science 2018-02-21 Austin R. Benson

Patterns stored within pre-trained deep neural networks compose large and powerful descriptive languages that can be used for many different purposes. Typically, deep network representations are implemented within vector embedding spaces,…

Neural and Evolutionary Computing · Computer Science 2017-08-10 Dario Garcia-Gasulla , Armand Vilalta , Ferran Parés , Jonatan Moreno , Eduard Ayguadé , Jesus Labarta , Ulises Cortés , Toyotaro Suzumura

Many data sets, crucial for today's applications, consist essentially of enormous networks, containing millions or even billions of elements. Having the possibility of visualizing such networks is of paramount importance. We propose an…

Data Structures and Algorithms · Computer Science 2023-07-25 Giuseppe Di Battista , Fabrizio Grosso , Silvia Montorselli , Maurizio Patrignani

We demonstrate that graphs embedded on surfaces are a powerful and practical tool to generate, characterize and simulate networks with a broad range of properties. Remarkably, the study of topologically embedded graphs is non-restrictive…

Other Condensed Matter · Physics 2015-03-19 Tomaso Aste , Ruggero Gramatica , T. Di Matteo

Graphs are a basic tool for the representation of modern data. The richness of the topological information contained in a graph goes far beyond its mere interpretation as a one-dimensional simplicial complex. We show how topological…

Combinatorics · Mathematics 2018-10-11 Mattia G. Bergomi , Massimo Ferri , Lorenzo Zuffi

While convolutional neural networks (CNNs) have recently made great strides in supervised classification of data structured on a grid (e.g. images composed of pixel grids), in several interesting datasets, the relations between features can…

Machine Learning · Computer Science 2018-11-02 Shrey Gadiya , Deepak Anand , Amit Sethi

Understanding the origins of complexity is a fundamental challenge with implications for biological and technological systems. Network theory emerges as a powerful tool to model complex systems. Networks are an intuitive framework to…

Disordered Systems and Neural Networks · Physics 2024-10-22 Blai Vidiella , Salva Duran-Nebreda , Sergi Valverde

The discovery of small world and scale free properties of many real world networks has revolutionized the way we study, analyze, model and process networks. An important way to analyze these complex networks is to visualize them using graph…

Social and Information Networks · Computer Science 2023-04-05 Faraz Zaidi

We offer a solution to a long-standing problem in the physics of networks, the creation of a plausible, solvable model of a network that displays clustering or transitivity -- the propensity for two neighbors of a network node also to be…

Statistical Mechanics · Physics 2009-08-13 M. E. J. Newman

Graphs may be used to represent many different problem domains -- a concrete example is that of detecting communities in social networks, which are represented as graphs. With big data and more sophisticated applications becoming widespread…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-04-03 Miguel E. Coimbra , Alexandre P. Francisco , Luis Veiga

The irreducible complexity of natural phenomena has led Graph Neural Networks to be employed as a standard model to perform representation learning tasks on graph-structured data. While their capacity to capture local and global patterns is…

Machine Learning · Computer Science 2024-02-13 Lorenzo Giusti

A large body of work has been devoted to defining and identifying clusters or communities in social and information networks. We explore from a novel perspective several questions related to identifying meaningful communities in large…

Data Structures and Algorithms · Computer Science 2008-10-13 Jure Leskovec , Kevin J. Lang , Anirban Dasgupta , Michael W. Mahoney

Network topology is a fundamental aspect of network science that allows us to gather insights into the complicated relational architectures of the world we inhabit. We provide a first specific study of neighbourhood degree sequences in…

Social and Information Networks · Computer Science 2019-06-11 Keith M. Smith

A linear layout of a graph typically consists of a total vertex order, and a partition of the edges into sets of either non-crossing edges, called stacks, or non-nested edges, called queues. The stack (queue) number of a graph is the…

Data Structures and Algorithms · Computer Science 2021-07-13 Jawaherul Md. Alam , Michael A. Bekos , Martin Gronemann , Michael Kaufmann , Sergey Pupyrev

The graph structure is a commonly used data storage mode, and it turns out that the low-dimensional embedded representation of nodes in the graph is extremely useful in various typical tasks, such as node classification, link prediction ,…

Social and Information Networks · Computer Science 2020-08-03 Xing Li , Wei Wei , Xiangnan Feng , Xue Liu , Zhiming Zheng

In this paper, we focus on graph learning from multi-view data of shared entities for spectral clustering. We can explain interactions between the entities in multi-view data using a multi-layer graph with a common vertex set, which…

Machine Learning · Computer Science 2021-03-04 Sravanthi Gurugubelli , Sundeep Prabhakar Chepuri

It is shown how to construct a clique graph in which properties of cliques of a fixed order in a given graph are represented by vertices in a weighted graph. Various definitions and motivations for these weights are given. The detection of…

Physics and Society · Physics 2011-01-04 T. S. Evans