English
Related papers

Related papers: BioMamba: Domain-Adaptive Biomedical Language Mode…

200 papers

Pathological diagnosis is highly reliant on image analysis, where Regions of Interest (ROIs) serve as the primary basis for diagnostic evidence, while whole-slide image (WSI)-level tasks primarily capture aggregated patterns. To extract…

Computer Vision and Pattern Recognition · Computer Science 2026-05-08 Enhui Chai , Sicheng Chen , Tianyi Zhang , Xingyu Li , Tianxiang Cui

In this work, we take the first exploration of the recently popular foundation model, i.e., State Space Model/Mamba, in image quality assessment (IQA), aiming at observing and excavating the perception potential in vision Mamba. A series of…

Computer Vision and Pattern Recognition · Computer Science 2025-05-30 Fengbin Guan , Xin Li , Zihao Yu , Yiting Lu , Zhibo Chen

The rapid growth of biomedical literature poses challenges for manual knowledge curation and synthesis. Biomedical Natural Language Processing (BioNLP) automates the process. While Large Language Models (LLMs) have shown promise in general…

The development of open-source, multilingual medical language models can benefit a wide, linguistically diverse audience from different regions. To promote this domain, we present contributions from the following: First, we construct a…

Computation and Language · Computer Science 2024-06-04 Pengcheng Qiu , Chaoyi Wu , Xiaoman Zhang , Weixiong Lin , Haicheng Wang , Ya Zhang , Yanfeng Wang , Weidi Xie

Depression is a prevalent mental health disorder that severely impairs daily functioning and quality of life. While recent deep learning approaches for depression detection have shown promise, most rely on limited feature types, overlook…

Computer Vision and Pattern Recognition · Computer Science 2026-02-10 Bowen Zhou , Marc-André Fiedler , Ayoub Al-Hamadi

There is vivid research on adapting Large Language Models (LLMs) to perform a variety of tasks in high-stakes domains such as healthcare. Despite their popularity, there is a lack of understanding of the extent and contributing factors that…

Computation and Language · Computer Science 2024-06-07 Anand Subramanian , Viktor Schlegel , Abhinav Ramesh Kashyap , Thanh-Tung Nguyen , Vijay Prakash Dwivedi , Stefan Winkler

In recent years, the application of multimodal large language models (MLLM) in various fields has achieved remarkable success. However, as the foundation model for many downstream tasks, current MLLMs are composed of the well-known…

Computer Vision and Pattern Recognition · Computer Science 2025-01-09 Han Zhao , Min Zhang , Wei Zhao , Pengxiang Ding , Siteng Huang , Donglin Wang

Acquiring high-quality annotated data for medical image segmentation is tedious and costly. Semi-supervised segmentation techniques alleviate this burden by leveraging unlabeled data to generate pseudo labels. Recently, advanced state space…

Computer Vision and Pattern Recognition · Computer Science 2025-08-20 Shumeng Li , Jian Zhang , Lei Qi , Luping Zhou , Yinghuan Shi , Yang Gao

Language model (LM) pretraining can learn various knowledge from text corpora, helping downstream tasks. However, existing methods such as BERT model a single document, and do not capture dependencies or knowledge that span across…

Computation and Language · Computer Science 2022-03-31 Michihiro Yasunaga , Jure Leskovec , Percy Liang

Accurate segmentation of 3D clinical medical images is critical in the diagnosis and treatment of spinal diseases. However, the inherent complexity of spinal anatomy and uncertainty inherent in current imaging technologies, poses…

Image and Video Processing · Electrical Eng. & Systems 2024-08-29 Zhiqing Zhang , Tianyong Liu , Guojia Fan , Bin Li , Qianjin Feng , Shoujun Zhou

BACKGROUND: Recent studies have shown that domain-adapted large language models (LLMs) do not consistently outperform general-purpose counterparts on standard medical benchmarks, raising questions about the need for specialized clinical…

Computation and Language · Computer Science 2026-04-09 Ane G. Domingo-Aldama , Iker De La Iglesia , Maitane Urruela , Aitziber Atutxa , Ander Barrena

Recent Transformer-based diffusion models have shown remarkable performance, largely attributed to the ability of the self-attention mechanism to accurately capture both global and local contexts by computing all-pair interactions among…

Computer Vision and Pattern Recognition · Computer Science 2024-09-20 Yunxiang Fu , Chaoqi Chen , Yizhou Yu

Pretrained biomedical vision-language models (VLMs) such as BioMedCLIP perform well on average but often degrade on challenging modalities where inter-class margins are small and acquisition-specific variations are pronounced, especially…

Computer Vision and Pattern Recognition · Computer Science 2026-04-21 Mainak Singha , Tanisha Gupta , Ankit Jha , Muhammad Haris Khan , Sayantani Ghosh , Biplab Banerjee

Medical visual question answering (Med-VQA) is a crucial multimodal task in clinical decision support and telemedicine. Recent self-attention based methods struggle to effectively handle cross-modal semantic alignments between vision and…

Computer Vision and Pattern Recognition · Computer Science 2025-11-04 Qiangguo Jin , Xianyao Zheng , Hui Cui , Changming Sun , Yuqi Fang , Cong Cong , Ran Su , Leyi Wei , Ping Xuan , Junbo Wang

Data science plays a critical role in biomedical research, but it requires professionals with expertise in coding and medical data analysis. Large language models (LLMs) have shown great potential in supporting medical tasks and performing…

Artificial Intelligence · Computer Science 2025-04-10 Zifeng Wang , Benjamin Danek , Ziwei Yang , Zheng Chen , Jimeng Sun

Effective pronunciation feedback is critical in second language (L2) learning, for which computer-assisted pronunciation training (CAPT) systems often encompass two key tasks: automatic pronunciation assessment (APA) and mispronunciation…

Computation and Language · Computer Science 2025-07-28 Tzu-Hsuan Yang , Yue-Yang He , Berlin Chen

Sequential recommendation systems aim to predict users' next preferences based on their interaction histories, but existing approaches face critical limitations in efficiency and multi-scale pattern recognition. While Transformer-based…

Information Retrieval · Computer Science 2025-05-08 Qianru Zhang , Liang Qu , Honggang Wen , Dong Huang , Siu-Ming Yiu , Nguyen Quoc Viet Hung , Hongzhi Yin

Despite the success of large language models (LLMs) on general-purpose tasks, their performance in highly specialized domains such as biomedicine remains unsatisfactory. A key limitation is the inability of LLMs to effectively leverage…

Computation and Language · Computer Science 2026-05-08 Xin Gao , Ruiyi Zhang , Meixi Du , Peijia Qin , Pengtao Xie

Recent advances in Vision Transformers (ViTs) and State Space Models (SSMs) have challenged the dominance of Convolutional Neural Networks (CNNs) in computer vision. ViTs excel at capturing global context, and SSMs like Mamba offer linear…

Computer Vision and Pattern Recognition · Computer Science 2025-09-08 Mustafa Munir , Alex Zhang , Radu Marculescu

Biomedical machine reading comprehension (biomedical-MRC) aims to comprehend complex biomedical narratives and assist healthcare professionals in retrieving information from them. The high performance of modern neural network-based MRC…

Computation and Language · Computer Science 2022-07-27 Maria Mahbub , Sudarshan Srinivasan , Edmon Begoli , Gregory D Peterson