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Recently, Magnetic Resonance Fingerprinting (MRF) was proposed as a quantitative imaging technique for the simultaneous acquisition of tissue parameters such as relaxation times $T_1$ and $T_2$. Although the acquisition is highly…

Image and Video Processing · Electrical Eng. & Systems 2019-07-23 Elisabeth Hoppe , Florian Thamm , Gregor Körzdörfer , Christopher Syben , Franziska Schirrmacher , Mathias Nittka , Josef Pfeuffer , Heiko Meyer , Andreas Maier

Current popular methods for Magnetic Resonance Fingerprint (MRF) recovery are bottlenecked by the heavy storage and computation requirements of a dictionary-matching (DM) step due to the growing size and complexity of the fingerprint…

Machine Learning · Computer Science 2018-11-06 Mohammad Golbabaee , Dongdong Chen , Pedro A. Gómez , Marion I. Menzel , Mike E. Davies

Current popular methods for Magnetic Resonance Fingerprint (MRF) recovery are bottlenecked by the heavy computations of a matched-filtering step due to the growing size and complexity of the fingerprint dictionaries in multi-parametric…

Computer Vision and Pattern Recognition · Computer Science 2018-10-05 Mohammad Golbabaee , Zhouye Chen , Yves Wiaux , Mike Davies

We explore the application of concepts developed in High Energy Physics (HEP) for advanced medical data analysis. Our study case is a problem with high social impact: clinically-feasible Magnetic Resonance Fingerprinting (MRF). MRF is a…

Quantitative magnetic resonance imaging (qMRI) is concerned with estimating (in physical units) values of magnetic and tissue parameters e.g., relaxation times $T_1$, $T_2$, or proton density $\rho$. Recently in [Ma et al., Nature, 2013],…

Optimization and Control · Mathematics 2019-03-29 Guozhi Dong , Michael Hintermüller , Kostas Papafitsoros

We introduce MRF-DiPh, a novel physics informed denoising diffusion approach for multiparametric tissue mapping from highly accelerated, transient-state quantitative MRI acquisitions like Magnetic Resonance Fingerprinting (MRF). Our method…

Image and Video Processing · Electrical Eng. & Systems 2025-07-01 Perla Mayo , Carolin M. Pirkl , Alin Achim , Bjoern Menze , Mohammad Golbabaee

Magnetic Resonance Fingerprinting (MRF) is an imaging technique acquiring unique time signals for different tissues. Although the acquisition is highly accelerated, the reconstruction time remains a problem, as the state-of-the-art template…

Image and Video Processing · Electrical Eng. & Systems 2019-09-17 Elisabeth Hoppe , Florian Thamm , Gregor Körzdörfer , Christopher Syben , Franziska Schirrmacher , Mathias Nittka , Josef Pfeuffer , Heiko Meyer , Andreas Maier

Compared with 2D MRI, 3D MRI provides superior volumetric spatial resolution and signal-to-noise ratio. However, it is more challenging to reconstruct 3D MRI images. Current methods are mainly based on convolutional neural networks (CNN)…

Image and Video Processing · Electrical Eng. & Systems 2023-06-01 Eric Z. Chen , Chi Zhang , Xiao Chen , Yikang Liu , Terrence Chen , Shanhui Sun

The data-driven approach of supervised learning methods has limited applicability in solving dipole inversion in Quantitative Susceptibility Mapping (QSM) with varying scan parameters across different objects. To address this generalization…

Image and Video Processing · Electrical Eng. & Systems 2023-08-21 Zhuang Xiong , Yang Gao , Yin Liu , Amir Fazlollahi , Peter Nestor , Feng Liu , Hongfu Sun

We propose a novel unsupervised deep-learning-based algorithm for dynamic magnetic resonance imaging (MRI) reconstruction. Dynamic MRI requires rapid data acquisition for the study of moving organs such as the heart. Existing reconstruction…

Image and Video Processing · Electrical Eng. & Systems 2021-01-26 Jaejun Yoo , Kyong Hwan Jin , Harshit Gupta , Jerome Yerly , Matthias Stuber , Michael Unser

3D volumetric reconstruction from incomplete or noisy measurements is a fundamental problem in medical imaging and computational tomography. Deep image prior (DIP)-based methods have recently shown strong capability for solving inverse…

Computational Engineering, Finance, and Science · Computer Science 2026-05-29 Haijie Yuan , Chaoyan Huang , Srijita Bandopadhyay , Liyue Shen , Saiprasad Ravishankar

Purpose: To improve image quality and accelerate the acquisition of 3D MRF. Methods: Building on the multi-axis spiral-projection MRF technique, a subspace reconstruction with locally low rank (LLR) constraint and a modified…

Magnetic Resonance Fingerprinting (MRF) enables simultaneous mapping of multiple tissue parameters such as T1 and T2 relaxation times. The working principle of MRF relies on varying acquisition parameters pseudo-randomly, so that each…

Image and Video Processing · Electrical Eng. & Systems 2020-12-03 Refik Soyak , Ebru Navruz , Eda Ozgu Ersoy , Gastao Cruz , Claudia Prieto , Andrew P. King , Devrim Unay , Ilkay Oksuz

Estimating tissue parameter maps with high accuracy and precision from highly undersampled measurements presents one of the major challenges in MR fingerprinting (MRF). Many existing works project the recovered voxel fingerprints onto the…

Image and Video Processing · Electrical Eng. & Systems 2023-10-18 Peng Li , Yuping Ji , Yue Hu

Neural Radiance Fields (NeRF) have achieved impressive results in 3D reconstruction and novel view generation. A significant challenge within NeRF involves editing reconstructed 3D scenes, such as object removal, which demands consistency…

Computer Vision and Pattern Recognition · Computer Science 2024-07-04 Zhihao Guo , Peng Wang

Parallel magnetic resonance imaging has served as an effective and widely adopted technique for accelerating scans. The advent of sparse sampling offers aggressive acceleration, allowing flexible sampling and better reconstruction.…

Medical Physics · Physics 2019-09-09 Xinlin Zhang , Di Guo , Yiman Huang , Ying Chen , Liansheng Wang , Feng Huang , Xiaobo Qu

Brain-to-image decoding has been recently propelled by the progress in generative AI models and the availability of large ultra-high field functional Magnetic Resonance Imaging (fMRI). However, current approaches depend on complicated…

Computer Vision and Pattern Recognition · Computer Science 2025-05-21 Marlène Careil , Yohann Benchetrit , Jean-Rémi King

MR Fingerprinting is a novel quantitative MR technique that could simultaneously provide multiple tissue property maps. When optimizing MRF scans, modeling undersampling errors and field imperfections in cost functions will make the…

Image and Video Processing · Electrical Eng. & Systems 2021-05-26 Siyuan Hu , Stephen Jordan , Rasim Boyacioglu , Ignacio Rozada , Matthias Troyer , Mark Griswold , Debra McGivney , Dan Ma

Magnetic Resonance Fingerprinting (MRF) has emerged as a promising quantitative MR imaging approach. Deep learning methods have been proposed for MRF and demonstrated improved performance over classical compressed sensing algorithms.…

Image and Video Processing · Electrical Eng. & Systems 2022-01-27 Dongdong Chen , Mike E. Davies , Mohammad Golbabaee

We introduce SMURF, a scalable and unsupervised machine learning method for simultaneously segmenting vascular geometries and reconstructing velocity fields from 4D flow MRI data. SMURF models geometry and velocity fields using multilayer…

Medical Physics · Physics 2026-01-27 Atharva Hans , Abhishek Singh , Pavlos Vlachos , Ilias Bilionis