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We study complex networks in which the nodes of the network are tagged with different colors depending on the functionality of the nodes (colored graphs), using information theory applied to the distribution of motifs in such networks. We…

Quantitative Methods · Quantitative Biology 2011-11-08 Christoph Adami , Jifeng Qian , Matthew Rupp , Arend Hintze

Higher-order networks effectively represent complex systems with group interactions. Existing methods usually overlook the relative contribution of group interactions (hyperlinks) of different sizes to the overall network structure. Yet,…

Physics and Society · Physics 2025-08-26 Alberto Ceria , Frank W. Takes

The design of efficient representations is well established as a fruitful way to explore and analyze complex or large data. In these representations, data are encoded with various visual attributes depending on the needs of the…

Graphics · Computer Science 2021-03-11 Loann Giovannangeli , Romain Giot , David Auber , Romain Bourqui

Based on a large dataset containing thousands of real-world networks ranging from genetic, protein interaction, and metabolic networks to brain, language, ecology, and social networks we search for defining structural measures of the…

Machine Learning · Computer Science 2021-06-22 Máté Józsa , Alpár S. Lázár , Zsolt I. Lázár

Graphs, consisting of vertices and edges, are vital for representing complex relationships in fields like social networks, finance, and blockchain. Visualizing these graphs helps analysts identify structural patterns, with readability…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-11-18 Sanggeon Yun

Understanding the structural characteristics of harmony is essential for an effective use of music as a communication medium. Of the three expressive axes of music (melody, rhythm, harmony), harmony is the foundation on which the emotional…

Multimedia · Computer Science 2020-01-13 Maria Rojo González , Simone Santini

The visual analysis of graphs in 3D has become increasingly popular, accelerated by the rise of immersive technology, such as augmented and virtual reality. Unlike 2D drawings, 3D graph layouts are highly viewpoint-dependent, making…

Human-Computer Interaction · Computer Science 2025-11-10 Lucas Joos , Gavin J. Mooney , Maximilian T. Fischer , Daniel A. Keim , Falk Schreiber , Helen C. Purchase , Karsten Klein

Using different methods for laying out a graph can lead to very different visual appearances, with which the viewer perceives different information. Selecting a "good" layout method is thus important for visualizing a graph. The selection…

Social and Information Networks · Computer Science 2017-10-13 Oh-Hyun Kwon , Tarik Crnovrsanin , Kwan-Liu Ma

An important design principle for biological oscillators divides the oscillators into two classes: fixed frequency, variable amplitude and fixed amplitude, variable frequency. Because of the interplay of nonlinearity and feedback, both…

Systems and Control · Electrical Eng. & Systems 2026-04-14 Sidhanta Mohanty , Shaunak Sen

Large-scale white matter pathways crisscrossing the cortex create a complex pattern of connectivity that underlies human cognitive function. Generative mechanisms for this architecture have been difficult to identify in part because little…

Neurons and Cognition · Quantitative Biology 2015-06-16 Florian Klimm , Danielle S. Bassett , Jean M. Carlson , Peter J. Mucha

The analysis of complex high-dimensional data is a common task in many domains, resulting in bespoke visual exploration tools. Expectations and practices of domain experts as users do not always align with visualization theory. In this…

Human-Computer Interaction · Computer Science 2024-04-08 Christian Knoll , Laura Koesten , Isotta Rigoni , Serge Vulliémoz , Torsten Möller

Higher-order connectivity patterns such as small induced sub-graphs called graphlets (network motifs) are vital to understand the important components (modules/functional units) governing the configuration and behavior of complex networks.…

Social and Information Networks · Computer Science 2020-09-15 Aldo G. Carranza , Ryan A. Rossi , Anup Rao , Eunyee Koh

Diagrams matter. Unfortunately, the deep learning community has no standard method for diagramming architectures. The current combination of linear algebra notation and ad-hoc diagrams fails to offer the necessary precision to understand…

Machine Learning · Computer Science 2024-02-09 Vincent Abbott

Well-designed data visualizations can lead to more powerful and intuitive processing by a viewer. To help a viewer intuitively compare values to quickly generate key takeaways, visualization designers can manipulate how data values are…

Human-Computer Interaction · Computer Science 2021-08-17 Cindy Xiong , Vidya Setlur , Benjamin Bach , Kylie Lin , Eunyee Koh , Steven Franconeri

Visualizing network data is applicable in domains such as biology, engineering, and social sciences. We report the results of a study comparing the effectiveness of the two primary techniques for showing network data: node-link diagrams and…

Human-Computer Interaction · Computer Science 2017-09-04 Mershack Okoe , Radu Jianu , Stephen Kobourov

Overlay networks, where nodes communicate with neighbors over logical links consisting of zero or more physical links, have become an important part of modern networking. From data centers to IoT devices, overlay networks are used to…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-09-30 Andrew Berns

Visualizing spatial correlations in 3D ensembles is challenging due to the vast amounts of information that need to be conveyed. Memory and time constraints make it unfeasible to pre-compute and store the correlations between all pairs of…

Graphics · Computer Science 2024-01-05 Christoph Neuhauser , Josef Stumpfegger , Rüdiger Westermann

Line charts surface many features in time series data, from trends to periodicity to peaks and valleys. However, not every potentially important feature in the data may correspond to a visual feature which readers can detect or prioritize.…

Human-Computer Interaction · Computer Science 2025-10-15 Rifat Ara Proma , Michael Correll , Ghulam Jilani Quadri , Paul Rosen

The causal dependence in data is often characterized by Directed Acyclic Graphical (DAG) models, widely used in many areas. Causal discovery aims to recover the DAG structure using observational data. This paper focuses on causal discovery…

Machine Learning · Computer Science 2024-06-12 Boxin Zhao , Weishi Wang , Dingyuan Zhu , Ziqi Liu , Dong Wang , Zhiqiang Zhang , Jun Zhou , Mladen Kolar

We explore the effects of data and design considerations through the example case of part-to-whole data relationships. Standard part-to-whole representations like pie charts and stacked bar charts make the relationships of parts to the…

Human-Computer Interaction · Computer Science 2026-01-21 Connor Bailey , Michael Gleicher