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There is no consensus on how to construct structural brain networks from diffusion MRI. How variations in pre-processing steps affect network reliability and its ability to distinguish subjects remains opaque. In this work, we address this…

Neurons and Cognition · Quantitative Biology 2017-06-20 Dmitry Petrov , Alexander Ivanov , Joshua Faskowitz , Boris Gutman , Daniel Moyer , Julio Villalon , Neda Jahanshad , Paul Thompson

Whole-brain neural connectivity data are now available from viral tracing experiments, which reveal the connections between a source injection site and elsewhere in the brain. These hold the promise of revealing spatial patterns of…

Neurons and Cognition · Quantitative Biology 2016-10-27 Kameron Decker Harris , Stefan Mihalas , Eric Shea-Brown

With the increased need for multi-center magnetic resonance imaging studies, problems arise related to differences in hardware and software between centers. Namely, current algorithms for brain volume quantification are unreliable for the…

Image and Video Processing · Electrical Eng. & Systems 2019-11-12 Maria Ines Meyer , Ezequiel de la Rosa , Koen Van Leemput , Diana M. Sima

Diffusion weighted MRI (dMRI) provides a non invasive virtual reconstruction of the brain's white matter structures through tractography. Analyzing dMRI measures along the trajectory of white matter bundles can provide a more specific…

Quantitative Methods · Quantitative Biology 2019-06-21 Samuel St-Jean , Maxime Chamberland , Max A. Viergever , Alexander Leemans

Hybrid X-ray and magnetic resonance (MR) imaging promises large potential in interventional medical imaging applications due to the broad variety of contrast of MRI combined with fast imaging of X-ray-based modalities. To fully utilize the…

Image and Video Processing · Electrical Eng. & Systems 2019-11-20 Bernhard Stimpel , Christopher Syben , Tobias Würfl , Katharina Breininger , Philipp Hoelter , Arnd Dörfler , Andreas Maier

Fundus image quality is crucial for diagnosing eye diseases, but real-world conditions often result in blurred or unreadable images, increasing diagnostic uncertainty. To address these challenges, this study proposes RetinaRegen, a hybrid…

Image and Video Processing · Electrical Eng. & Systems 2025-02-28 Yuhan Tang , Yudian Wang , Weizhen Li , Ye Yue , Chengchang Pan , Honggang Qi

Resting-state brain functional connectivity quantifies the synchrony between activity patterns of different brain regions. In functional magnetic resonance imaging (fMRI), each region comprises a set of spatially contiguous voxels at which…

Methodology · Statistics 2025-11-07 Ruobin Liu , Chao Zhang , Chau Tran , Sophie Achard , Wendy Meiring , Alexander Petersen

Processing of Diffusion MRI data obtained from High Angular Resolution measurements consists of a series of steps, starting with the estimation of an orientation distribution function (ODF), which is then used as input for e.g. tractography…

Numerical Analysis · Mathematics 2015-12-23 T. Hohage , C. Rügge

Tract-specific diffusion measures, as derived from brain diffusion MRI, have been linked to white matter tract structural integrity and neurodegeneration. As a consequence, there is a large interest in the automatic segmentation of white…

Image and Video Processing · Electrical Eng. & Systems 2019-08-28 Bo Li , Marius de Groot , Meike Vernooij , Arfan Ikram , Wiro Niessen , Esther Bron

Methods on reducing resonant frequencies and electrical sizes of resonators are reported in this paper. Theoreti-cal and numerical analysis has been used and the results for the broadside-coupled resonators from both studies exhibit good…

Optics · Physics 2008-10-15 T. Hao , J. Zhu , D. J. Edwards , C. J. Stevens

Magnetic resonance imaging (MRI) reconstruction is a fundamental task aimed at recovering high-quality images from undersampled or low-quality MRI data. This process enhances diagnostic accuracy and optimizes clinical applications. In…

Image and Video Processing · Electrical Eng. & Systems 2025-03-11 Xiaoyan Kui , Zijie Fan , Zexin Ji , Qinsong Li , Chengtao Liu , Weixin Si , Beiji Zou

We propose a new strategy for obtaining enhanced resolution (FWHM = 0.12 arcsec) deep optical images over a wide field of view. As is well known, this type of image quality can be obtained in principle simply by fast guiding on a small (D =…

Astrophysics · Physics 2009-10-31 N. Kaiser , J. L. Tonry , G. A. Luppino

Models of diffusion MRI within a voxel are useful for making inferences about the properties of the tissue and inferring fiber orientation distribution used by tractography algorithms. A useful model must fit the data accurately. However,…

Quantitative Methods · Quantitative Biology 2017-02-08 Ariel Rokem , Jason D. Yeatman , Franco Pestilli , Kendrick N. Kay , Aviv Mezer , Stefan van der Walt , Brian A. Wandell

Diffusion magnetic resonance has been employed for determining the distribution of net displacements (ensemble average propagator), moments and correlations of net displacements, and the steady-state distribution of magnetized particles.…

Materials Science · Physics 2021-05-04 Evren Özarslan

Diffusion-weighted magnetic resonance imaging (DW-MRI) is a non-invasive way of imaging white matter tracts in the human brain. DW-MRIs are usually acquired using echo-planar imaging (EPI) with high gradient fields, which could introduce…

Image and Video Processing · Electrical Eng. & Systems 2023-04-04 Zhangxing Bian , Muhan Shao , Aaron Carass , Jerry L. Prince

The brain structural connectome is generated by a collection of white matter fiber bundles constructed from diffusion weighted MRI (dMRI), acting as highways for neural activity. There has been abundant interest in studying how the…

Methodology · Statistics 2022-11-03 Didong Li , Phuc Nguyen , Zhengwu Zhang , David B Dunson

In this work, we address the limitations of denoising diffusion models (DDMs) in image restoration tasks, particularly the shape and color distortions that can compromise image quality. While DDMs have demonstrated a promising performance…

Computer Vision and Pattern Recognition · Computer Science 2024-12-18 Xinlong Cheng , Tiantian Cao , Guoan Cheng , Bangxuan Huang , Xinghan Tian , Ye Wang , Xiaoyu He , Weixin Li , Tianfan Xue , Xuan Dong

Large bundles of myelinated axons, called white matter, anatomically connect disparate brain regions together and compose the structural core of the human connectome. We recently proposed a method of measuring the local integrity along the…

Applications · Statistics 2018-09-18 Yo Joong Choe , Sivaraman Balakrishnan , Aarti Singh , Jean M. Vettel , Timothy Verstynen

We propose a patch-based singular value shrinkage method for diffusion magnetic resonance image estimation targeted at low signal to noise ratio and accelerated acquisitions. It operates on the complex data resulting from a sensitivity…

Image and Video Processing · Electrical Eng. & Systems 2019-06-21 Lucilio Cordero-Grande , Daan Christiaens , Jana Hutter , Anthony N. Price , Joseph V. Hajnal
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