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Large language models (LLMs) have large potential for molecular optimization, as they can gather external chemistry tools and enable collaborative interactions to iteratively refine molecular candidates. However, this potential remains…

Artificial Intelligence · Computer Science 2025-05-28 Hyomin Kim , Yunhui Jang , Sungsoo Ahn

The application of language models (LMs) to molecular structure generation using line notations such as SMILES and SELFIES has been well-established in the field of cheminformatics. However, extending these models to generate 3D molecular…

Machine Learning · Computer Science 2024-12-03 Kaiyuan Gao , Yusong Wang , Haoxiang Guan , Zun Wang , Qizhi Pei , John E. Hopcroft , Kun He , Lijun Wu

Randomly masking and predicting word tokens has been a successful approach in pre-training language models for a variety of downstream tasks. In this work, we observe that the same idea also applies naturally to sequential decision-making,…

The Contrastive Language-Image Pre-training (CLIP) framework has become a widely used approach for multimodal representation learning, particularly in image-text retrieval and clustering. However, its efficacy is constrained by three key…

Computer Vision and Pattern Recognition · Computer Science 2025-12-09 Tiancheng Gu , Kaicheng Yang , Ziyong Feng , Xingjun Wang , Yanzhao Zhang , Dingkun Long , Yingda Chen , Weidong Cai , Jiankang Deng

We introduce UGen, a unified autoregressive multimodal model that demonstrates strong performance across text processing, image understanding, and image generation tasks simultaneously. UGen converts both texts and images into discrete…

Computation and Language · Computer Science 2025-03-28 Hongxuan Tang , Hao Liu , Xinyan Xiao

Molecular representation learning plays a crucial role in advancing applications such as drug discovery and material design. Existing work leverages 2D and 3D modalities of molecular information for pre-training, aiming to capture…

Machine Learning · Computer Science 2025-10-09 Tengwei Song , Min Wu , Yuan Fang

Knowledge distillation (KD) has become a prevalent technique for compressing large language models (LLMs). Existing KD methods are constrained by the need for identical tokenizers (i.e., vocabularies) between teacher and student models,…

Computation and Language · Computer Science 2025-01-22 Xiao Cui , Mo Zhu , Yulei Qin , Liang Xie , Wengang Zhou , Houqiang Li

Image-based virtual try-on (VTON) aims to synthesize photorealistic images of a person wearing specified garments. Despite significant progress, building a universal VTON framework that can flexibly handle diverse and complex tasks remains…

Computer Vision and Pattern Recognition · Computer Science 2026-02-11 Wei Zhang , Yeying Jin , Xin Li , Yan Zhang , Xiaofeng Cong , Cong Wang , Fengcai Qiao , zhichao Lian

Text-guided molecule generation is a task where molecules are generated to match specific textual descriptions. Recently, most existing SMILES-based molecule generation methods rely on an autoregressive architecture. In this work, we…

Machine Learning · Computer Science 2024-02-21 Haisong Gong , Qiang Liu , Shu Wu , Liang Wang

The recent advances in neural language models have also been successfully applied to the field of chemistry, offering generative solutions for classical problems in molecular design and synthesis planning. These new methods have the…

Machine Learning · Computer Science 2023-05-19 Dimitrios Christofidellis , Giorgio Giannone , Jannis Born , Ole Winther , Teodoro Laino , Matteo Manica

Generating lifelike human motions from descriptive texts has experienced remarkable research focus in the recent years, propelled by the emerging requirements of digital humans.Despite impressive advances, existing approaches are often…

Computer Vision and Pattern Recognition · Computer Science 2024-10-30 Yuan Wang , Di Huang , Yaqi Zhang , Wanli Ouyang , Jile Jiao , Xuetao Feng , Yan Zhou , Pengfei Wan , Shixiang Tang , Dan Xu

How can we quantize large language models while preserving accuracy? Quantization is essential for deploying large language models (LLMs) efficiently. Binary-coding quantization (BCQ) and uniform quantization (UQ) are promising quantization…

Computation and Language · Computer Science 2025-06-17 Seungcheol Park , Jeongin Bae , Beomseok Kwon , Minjun Kim , Byeongwook Kim , Se Jung Kwon , U Kang , Dongsoo Lee

In the development of Large Language Models (LLMs), considerable attention has been given to the quality of training datasets. However, the role of tokenizers in the LLM training pipeline, particularly for multilingual models, has received…

Computation and Language · Computer Science 2024-10-18 Iaroslav Chelombitko , Egor Safronov , Aleksey Komissarov

We introduce G2T-LLM, a novel approach for molecule generation that uses graph-to-tree text encoding to transform graph-based molecular structures into a hierarchical text format optimized for large language models (LLMs). This encoding…

Machine Learning · Computer Science 2024-10-04 Zhaoning Yu , Xiangyang Xu , Hongyang Gao

Tokenization significantly influences language models(LMs)' performance. This paper traces the evolution of tokenizers from word-level to subword-level, analyzing how they balance tokens and types to enhance model adaptability while…

Computation and Language · Computer Science 2024-03-04 Jinbiao Yang

Molecular Dynamics (MD) simulations are essential for understanding the atomic-level behavior of molecular systems, giving insights into their transitions and interactions. However, classical MD techniques are limited by the trade-off…

Biomolecules · Quantitative Biology 2026-04-21 Ziyang Yu , Wenbing Huang , Yang Liu

Chain-of-Thought (CoT) reasoning has been widely adopted to enhance Large Language Models (LLMs) by decomposing complex tasks into simpler, sequential subtasks. However, extending CoT to vision-language reasoning tasks remains challenging,…

Computer Vision and Pattern Recognition · Computer Science 2026-03-03 Luozheng Qin , Jia Gong , Yuqing Sun , Tianjiao Li , Mengping Yang , Xiaomeng Yang , Chao Qu , Zhiyu Tan , Hao Li

How to boost speech pre-training with textual data is an unsolved problem due to the fact that speech and text are very different modalities with distinct characteristics. In this paper, we propose a cross-modal Speech and Language Model…

Computation and Language · Computer Science 2023-06-16 Ziqiang Zhang , Sanyuan Chen , Long Zhou , Yu Wu , Shuo Ren , Shujie Liu , Zhuoyuan Yao , Xun Gong , Lirong Dai , Jinyu Li , Furu Wei

In scientific research and its application, scientific literature analysis is crucial as it allows researchers to build on the work of others. However, the fast growth of scientific knowledge has led to a massive increase in scholarly…

Large-scale foundation models (LFMs) have recently made impressive progress in text-to-motion generation by learning strong generative priors from massive 3D human motion datasets and paired text descriptions. However, how to effectively…

Computer Vision and Pattern Recognition · Computer Science 2026-03-18 Xiaoyan Cong , Zekun Li , Zhiyang Dou , Hongyu Li , Omid Taheri , Chuan Guo , Abhay Mittal , Sizhe An , Taku Komura , Wojciech Matusik , Michael J. Black , Srinath Sridhar
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