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Related papers: Propagation of Enzyme-driven Active Fluctuations i…

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Evidence suggests that the transport rate of a passive particle at long timescales is enhanced due to interactions with the surrounding active ones in a size- and composition-dependent manner. Using a system of particles with different…

Soft Condensed Matter · Physics 2021-07-14 Efe Ilker , Michele Castellana , Jean-François Joanny

The motion of active polymers in a porous medium is shown to depend critically on flexibilty, activity and degree of polymerization. For given Peclet number, we observe a transition from localisation to diffusion as the stiffness of the…

Soft Condensed Matter · Physics 2019-07-17 Zahra Mokhtari , Annette Zippelius

The functioning and efficiency of natural photosynthetic complexes is strongly influenced by their embedding in a noisy protein environment, which can even serve to enhance the transport efficiency. Interactions with the environment induce…

Biological Physics · Physics 2015-06-03 Sebastiaan M. Vlaming , Robert J. Silbey

We investigate the dynamics of a massive tracer particle coupled to an interacting active bath, modeled as a harmonic chain of overdamped active particles analytically, with an aim to understand the impact of bath interactions and activity…

Statistical Mechanics · Physics 2025-09-03 Ritwick Sarkar , Ion Santra

Classical descriptions of enzyme kinetics ignore the physical nature of the intracellular environment. Main implicit assumptions behind such approaches are that reactions occur in compartment volumes which are large enough so that molecular…

Subcellular Processes · Quantitative Biology 2009-10-26 Ramon Grima

Predicting and controlling the transport of colloids in porous media is essential for applications ranging from contaminant remediation to drug delivery. In these complex environments, solute gradients are ubiquitous and could drive…

Soft Condensed Matter · Physics 2026-05-27 Aditya R. Pujari , Amir A. Pahlavan

We study how an active bath is transduced into the internal fluctuation spectrum of a semiflexible polymer. Starting from the statistics of active forces exerted by an explicit bath of active Brownian particles, we derive an effective…

Soft Condensed Matter · Physics 2026-04-14 Love Grover , Anil Kumar Dasanna , Abhishek Chaudhuri

We use numerical simulations to examine two-dimensional particle mixtures that strongly phase separate in equilibrium. When the system is externally driven in the presence of quenched disorder, plastic flow occurs in the form of meandering…

Statistical Mechanics · Physics 2009-11-13 A. Libal , C. Reichhardt , C. J. Olson Reichhardt

We investigate the dispersion of solutes in active nematic fluids confined in narrow channels based on simulations of nematohydrodynamics. The study focuses on two pre-turbulent regimes: oscillatory flow, with net mass flux, and dancing…

Soft Condensed Matter · Physics 2026-04-13 Tomás Alvim , Margarida M. Telo da Gama , Rodrigo C. V. Coelho

Active fluctuations are detected in a growing number of systems due to self-propulsion mechanisms or collisions with active environment. They drive the system far from equilibrium and can induce phenomena which at equilibrium states are…

Statistical Mechanics · Physics 2024-09-12 K. Białas , J. Łuczka , J. Spiechowicz

In this work, we study the dynamics of a single active Brownian particle, as well as the collective behavior of interacting active Brownian particles, in a fluctuating heterogeneous environment. We employ a variant of the diffusing…

Soft Condensed Matter · Physics 2022-01-05 S. M. J. Khadem , N. H. Siboni , S. H. L. Klapp

We study the enzymatic degradation of an elastic fiber under tension using an an isotropic random-walk model, coupled with binding-unbinding reactions that weaken the fiber. The fiber is represented by a chain of elastic springs in series,…

Statistical Mechanics · Physics 2009-10-08 Ascânio D. Araújo , Arnab Majumdar , Harikrishnan Parame swaran , Béla Suki

Interactions between inertia-gravity waves and balanced flows lead to a spectral diffusion of wave action. Prior work has established that this diffusion is weak across constant frequency surfaces in three-dimensional settings, but can be…

Fluid Dynamics · Physics 2026-05-04 Nicholas DeFilippis , Oliver Bühler , K. Shafer Smith

Given their capability of spreading active chemical species and collecting electricity, porous media made of carbon fibers are extensively used as diffusion layers in energy storage systems, such as redox flow batteries. In spite of this,…

Fluid Dynamics · Physics 2017-03-20 Dario Maggiolo , Francesco Picano , Massimo Guarnieri

We study a minimal model of active transport in crowded single-file environments which generalises the emblematic model of single file diffusion to the case when the tracer particle (TP) performs either an autonomous directed motion or is…

Statistical Mechanics · Physics 2013-03-13 P. Illien , O. Bénichou , C. Mejía-Monasterio , G. Oshanin , R. Voituriez

A simple model of an active colloid consisting of dumbbell-shaped particles that cyclically change their length without propelling themselves is proposed and analyzed. At nanoscales, it represents an idealization for bacterial cytoplasm or…

Adaptation and Self-Organizing Systems · Physics 2020-01-28 Yuki Koyano , Hiroyuki Kitahata , Alexander S. Mikhailov

The diffusion type is determined not only by microscopic dynamics but also by the environment properties. For example, the environment's fractal structure is responsible for the emergence of subdiffusive scaling of the mean square…

Statistical Mechanics · Physics 2021-10-26 Piotr Kubala , Michał Cieśla , Bartłomiej Dybiec

We introduce and study a model of active Brownian motion with multiplicative noise describing fluctuations in the self-propulsion or activity. We find that the standard picture of density accumulation in slow regions is qualitatively…

Soft Condensed Matter · Physics 2023-03-29 Benoît Mahault , Prakhar Godara , Ramin Golestanian

Several experiments on tagged molecules or particles in living systems suggest that they move anomalously slow - their mean squared displacement (MSD) increase slower than linearly with time. Leading models aimed at understanding these…

Statistical Mechanics · Physics 2017-01-04 Ludvig Lizana , Tobias Ambjörnsson , Michael A. Lomholt

We numerically study the energy transfer in a multi-component $2d$ film, made of an active polar gel and a passive isotropic fluid in presence of surfactant favoring emulsification. We show that by confining the active behavior into the…

Soft Condensed Matter · Physics 2020-08-18 Livio Nicola Carenza , Luca Biferale , Giuseppe Gonnella