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Motivated by the phenomenology of transport through the Golgi apparatus of cells, we study a multi-species model with boundary injection of one species of particle, interconversion between the different species of particle, and driven…

Statistical Mechanics · Physics 2011-09-29 Himani Sachdeva , Mustansir Barma , Madan Rao

The finite cell method is a highly flexible discretization technique for numerical analysis on domains with complex geometries. By using a non-boundary conforming computational domain that can be easily meshed, automatized computations on a…

We present a method to study phase transitions in the large N limit of matrix models using matched solutions of Whitham hierarchies. The endpoints of the eigenvalue spectrum as functions of the temperature are characterized both as…

Mathematical Physics · Physics 2010-04-06 Gabriel Alvarez , Luis Martinez Alonso , Elena Medina

We consider numerical solution of elliptic problems with heterogeneous diffusion coefficients containing thin highly conductive structures. Such problems arise e.g. in fractured porous media, reinforced materials, and electric circuits. The…

Numerical Analysis · Mathematics 2020-07-22 Fredrik Hellman , Axel Målqvist , Siyang Wang

The Glauber model is reconsidered based on a quantum formulation of the Master equation. Unlike the conventional approach the temperature and the Ising energy are included from the beginning by introducing a Heisenberg-like picture of the…

Statistical Mechanics · Physics 2009-11-11 Thomas Michael , Steffen Trimper , Michael Schulz

Evaporation/condensation transition of the Potts model on square lattice is numerically investigated by the Wang-Landau sampling method. Intrinsically system size dependent discrete transition between supersaturation state and…

Statistical Mechanics · Physics 2011-12-13 Tomoaki Nogawa , Nobuyasu Ito , Hiroshi Watanabe

Motivated by solid-solid phase transitions in elastic thin films, we perform a Gamma-convergence analysis for a singularly perturbed energy describing second order phase transitions in a domain of vanishing thickness. Under a two-wells…

Analysis of PDEs · Mathematics 2012-02-29 Bernardo Galvão-Sousa , Vincent Millot

We consider a moving boundary mathematical model of biological invasion. The model describes the spatiotemporal evolution of two adjacent populations: each population undergoes linear diffusion and logistic growth, and the boundary between…

Populations and Evolution · Quantitative Biology 2023-09-06 Matthew J Simpson , Nizhum Rahman , Scott W McCue , Alexander KY Tam

We present an algorithm to analyze numerically the bounce solution of first-order phase transitions. Our approach is well suited to treat phase transitions with several fields. The algorithm consists of two parts. In the first part the…

High Energy Physics - Phenomenology · Physics 2009-11-11 Thomas Konstandin , Stephan J. Huber

We consider a biphasic continuum model for avascular tumour growth in two spatial dimensions, in which a cell phase and a fluid phase follow conservation of mass and momentum. A limiting nutrient that follows a diffusion process controls…

Numerical Analysis · Mathematics 2020-10-21 Jerome Droniou , Jennifer A. Flegg , Gopikrishnan C. Remesan

The computer-assisted modeling of re-entrant production lines, and, in particular, simulation scalability, is attracting a lot of attention due to the importance of such lines in semiconductor manufacturing. Re-entrant flows lead to…

Dynamical Systems · Mathematics 2009-11-11 Y. Zou , I. G. Kevrekidis , D. Armbruster

The paper is devoted to the optimal control of a system with two time-scales, in a regime when the limit equation is not of averaging type but, in the spirit of Wong-Zakai principle, it is a stochastic differential equation for the slow…

Optimization and Control · Mathematics 2024-11-26 Franco Flandoli , Giuseppina Guatteri , Umberto Pappalettera , Gianmario Tessitore

In this paper, we consider the task of efficiently computing the numerical solution of evolutionary complex Ginzburg--Landau equations on Cartesian product domains with homogeneous Dirichlet/Neumann or periodic boundary conditions. To this…

Numerical Analysis · Mathematics 2024-06-19 Marco Caliari , Fabio Cassini

We study finite-temperature phase transitions in a two-dimensional boson Hubbard model with zero-point quantum fluctuations via Monte Carlo simulations of quantum rotor model, and construct the corresponding phase diagram. Compressibility…

Strongly Correlated Electrons · Physics 2009-11-13 Min-Chul Cha , Ji-Woo Lee

Boundary conditions may change the phase diagram of non-equilibrium statistical systems like the one-dimensional asymmetric simple exclusion process with and without particle number conservation. Using the quantum Hamiltonian approach, the…

High Energy Physics - Theory · Physics 2009-10-22 Malte Henkel , Gunter Schütz

We present a continuum theory to describe elastically induced phase transitions between coherent solid phases. In the limit of vanishing elastic constants in one of the phases, the model can be used to describe fracture on the basis of the…

Materials Science · Physics 2009-11-13 R. Spatschek , C. Mueller-Gugenberger , E. Brener , B. Nestler

A novel numerical technique has been proposed to solve a two-phase tumour growth model in one spatial dimension without needing to account for the boundary dynamics explicitly. The equivalence to the standard definition of a weak solution…

Numerical Analysis · Mathematics 2019-02-19 Gopikrishnan C. Remesan

Tissue growth can be modeled in two dimension by only using circular granular cells, which can grow and produce child. Linear spring-dashpot model is used to bind the cells with a cut-off interaction range of 1.1 times sum of radii of…

Biological Physics · Physics 2014-05-21 Sparisoma Viridi , Siti Nurul Khotimah , Devi Aprianti , Luman Haris , Freddy Haryanto

Using formal asymptotic methods we derive a free boundary problem representing one of the simplest mathematical descriptions of the growth and death of a tumour or other biological tissue. The mathematical model takes the form of a closed…

Tissues and Organs · Quantitative Biology 2019-07-16 Joe Eyles , John F. King , Vanessa Styles

We present a macroscopic model of the decay of a coherent classical scalar field into statistical fluctuations through the process of parametric amplification. We solve the field theory (henceforth,"microscopic") model to leading order in a…

High Energy Physics - Phenomenology · Physics 2007-05-23 Esteban Calzetta , Marc Thibeault