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The ability to effectively control brain dynamics holds great promise for the enhancement of cognitive function in humans, and the betterment of their quality of life. Yet, successfully controlling dynamics in neural systems is challenging,…

Quantitative Methods · Quantitative Biology 2018-08-29 Evelyn Tang , Danielle S. Bassett

Memory is an important cognitive function for humans. How a brain with such a small power can complete such a complex memory function, the working mechanism behind this is undoubtedly fascinating. Engram theory views memory as the…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-07-13 Hui Wei , Weihua Miao , Fushun Li

In the last two decades we are witnessing a huge increase of valuable big data structured in the form of graphs or networks. To apply traditional machine learning and data analytic techniques to such data it is necessary to transform graphs…

Machine Learning · Computer Science 2024-03-22 Aleksandar Tomčić , Miloš Savić , Miloš Radovanović

Noninvasive medical neuroimaging has yielded many discoveries about the brain connectivity. Several substantial techniques mapping morphological, structural and functional brain connectivities were developed to create a comprehensive road…

Machine Learning · Computer Science 2022-09-30 Alaa Bessadok , Mohamed Ali Mahjoub , Islem Rekik

This paper builds on the connection between graph neural networks and traditional dynamical systems. We propose continuous graph neural networks (CGNN), which generalise existing graph neural networks with discrete dynamics in that they can…

Machine Learning · Computer Science 2020-07-17 Louis-Pascal A. C. Xhonneux , Meng Qu , Jian Tang

Endowing brain anatomy, dynamics, and function with a network structure is becoming standard in neuroscience. In its simplest form, a network is a collection of units and relationships between them. The pattern of relations among the units…

Neurons and Cognition · Quantitative Biology 2025-07-22 David Papo , Javier M. Buldú

We introduce Graph Neural Processes (GNP), inspired by the recent work in conditional and latent neural processes. A Graph Neural Process is defined as a Conditional Neural Process that operates on arbitrary graph data. It takes features of…

Machine Learning · Computer Science 2019-10-03 Andrew Carr , David Wingate

Brain connectomics is still largely dominated by pairwise-based models, such as graphs, which cannot represent circulatory or higher-order functional interactions. In this paper, we propose a multimodal framework based on Topological Signal…

Neurons and Cognition · Quantitative Biology 2026-04-01 Breno C. Bispo , Stefania Sardellitti , Juliano B. Lima , Fernando A. N. Santos

We consider a spike-generating stationary Markov process whose transition probabilities are known. We show that there is a canonical potential whose Gibbs distribution, obtained from the Maximum Entropy Principle (MaxEnt), is the…

Neurons and Cognition · Quantitative Biology 2014-01-07 Rodrigo Cofre , Bruno Cessac

We propose a method for the classification of objects that are structured as random trees. Our aim is to model a distribution over the node label assignments in settings where the tree data structure is associated with node attributes…

Machine Learning · Computer Science 2024-09-18 Wouter W. L. Nuijten , Vlado Menkovski

This paper shows how a folded Markov chain network can be applied to the problem of processing data from multiple sensors, with an emphasis on the special case of 2 sensors. It is necessary to design the network so that it can transform a…

Neural and Evolutionary Computing · Computer Science 2010-12-21 S P Luttrell

Complex problem solving is a high level cognitive process which has been thoroughly studied over the last decade. The Tower of London (TOL) is a task that has been widely used to study problem-solving. In this study, we aim to explore the…

Neurons and Cognition · Quantitative Biology 2018-10-12 Abdullah Alchihabi , Omer Ekmekci , Baran B. Kivilcim , Sharlene D. Newman , Fatos T. Yarman Vural

A single axon can generate branches connecting with plenty synaptic targets. Process of branching is very important for making connections in central nervous system. The interstitial branching along primary axon shaft occurs during nervous…

Neurons and Cognition · Quantitative Biology 2013-04-25 Y. Suleymanov , F. Gafarov , N. Khusnutdinov

Already two decades passed since the first applications of graph theory to brain neuroimaging. Since that early description, the characterization of the brain as a very large interacting complex network has evolved in several directions. In…

Neurons and Cognition · Quantitative Biology 2021-12-21 Dante R. Chialvo , Ignacio Cifre , Jeremi K. Ochab

Recommender system is one of the most important information services on today's Internet. Recently, graph neural networks have become the new state-of-the-art approach to recommender systems. In this survey, we conduct a comprehensive…

Information Retrieval · Computer Science 2023-01-13 Chen Gao , Yu Zheng , Nian Li , Yinfeng Li , Yingrong Qin , Jinghua Piao , Yuhan Quan , Jianxin Chang , Depeng Jin , Xiangnan He , Yong Li

It is possible to represent each of a number of Markov chains as an evolving sequence of connected subsets of a directed acyclic graph that grow in the following way: initially, all vertices of the graph are unoccupied, particles are fed in…

Probability · Mathematics 2015-03-17 Steven N. Evans , Rudolf Gruebel , Anton Wakolbinger

We propose generalizations of a number of standard network models, including the classic random graph, the configuration model, and the stochastic block model, to the case of time-varying networks. We assume that the presence and absence of…

Social and Information Networks · Computer Science 2018-05-02 Xiao Zhang , Cristopher Moore , M. E. J. Newman

A key feature of neural network architectures is their ability to support the simultaneous interaction among large numbers of units in the learning and processing of representations. However, how the richness of such interactions trades off…

This paper proposes a family of network centralities called fixed-point centralities. This centrality family is defined via the fixed point of permutation equivariant mappings related to the underlying network. Such a centrality notion is…

Systems and Control · Electrical Eng. & Systems 2022-09-16 Shuang Gao

Knowledge graphs are an expressive and widely used data structure due to their ability to integrate data from different domains in a sensible and machine-readable way. Thus, they can be used to model a variety of systems such as molecules…

Neural and Evolutionary Computing · Computer Science 2023-08-28 Dominik Dold , Josep Soler Garrido , Victor Caceres Chian , Marcel Hildebrandt , Thomas Runkler
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