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Large-scale test collections play a crucial role in Information Retrieval (IR) research. However, according to the Cranfield paradigm and the research into publicly available datasets, the existing information retrieval research studies are…

Information Retrieval · Computer Science 2025-01-28 Hossein A. Rahmani , Xi Wang , Emine Yilmaz , Nick Craswell , Bhaskar Mitra , Paul Thomas

Multimodal large language models (MLLMs) have advanced clinical tasks for common conditions, but their performance on rare diseases remains largely untested. In rare-disease scenarios, clinicians often lack prior clinical knowledge, forcing…

Computer Vision and Pattern Recognition · Computer Science 2026-05-14 Junzhi Ning , Jiashi Lin , Yingying Fang , Wei Li , Jiyao Liu , Cheng Tang , Chenglong Ma , Wenhao Tang , Tianbin Li , Ziyan Huang , Guang Yang , Junjun He

Classifying journals or publications into research areas is an essential element of many bibliometric analyses. Classification usually takes place at the level of journals, where the Web of Science subject categories are the most popular…

Digital Libraries · Computer Science 2012-03-05 Ludo Waltman , Nees Jan van Eck

Large language models (LLMs) have demonstrated remarkable performance on various medical benchmarks, but their capabilities across different cognitive levels remain underexplored. Inspired by Bloom's Taxonomy, we propose a…

Computation and Language · Computer Science 2025-06-11 Yuxuan Zhou , Xien Liu , Chenwei Yan , Chen Ning , Xiao Zhang , Boxun Li , Xiangling Fu , Shijin Wang , Guoping Hu , Yu Wang , Ji Wu

Recent efforts in bioinformatics have achieved tremendous progress in the machine reading of biomedical literature, and the assembly of the extracted biochemical interactions into large-scale models such as protein signaling pathways.…

Artificial Intelligence · Computer Science 2017-09-04 Enrique Noriega-Atala , Marco A. Valenzuela-Escarcega , Clayton T. Morrison , Mihai Surdeanu

This paper presents a method for classifying the varying degrees of interdependency between academic hospitals and universities in the context of the Leiden Ranking. A key question for ranking universities is whether or not to allocate the…

Digital Libraries · Computer Science 2021-05-31 Andrea Reyes Elizondo , Clara Calero-Medina , Martijn S. Visser

As large language models (LLMs) become increasingly integrated into clinical decision-making, ensuring transparent and trustworthy reasoning is essential. However, existing evaluation strategies of LLMs' medical reasoning capability either…

The conventional Cranfield paradigm struggles to effectively capture user satisfaction due to its weak correlation between relevance and satisfaction, alongside the high costs of relevance annotation in building test collections. To tackle…

Information Retrieval · Computer Science 2025-06-12 Xingzhu Wang , Erhan Zhang , Yiqun Chen , Jinghan Xuan , Yucheng Hou , Yitong Xu , Ying Nie , Shuaiqiang Wang , Dawei Yin , Jiaxin Mao

Large language models (LLMs) have shown promise in medical question answering but often struggle with hallucinations and shallow reasoning, particularly in tasks requiring nuanced clinical understanding. Retrieval-augmented generation (RAG)…

Computation and Language · Computer Science 2025-08-25 Ziyu Wang , Elahe Khatibi , Amir M. Rahmani

Accurate and reliable search on online healthcare platforms is critical for user safety and service efficacy. Traditional methods, however, often fail to comprehend complex and nuanced user queries, limiting their effectiveness. Large…

Computation and Language · Computer Science 2025-12-04 Chuyue Wang , Jie Feng , Yuxi Wu , Hang Zhang , Zhiguo Fan , Bing Cheng , Wei Lin

The rapid advancement of large language models (LLMs) has accelerated their integration into clinical decision support, particularly in prescription review. To enable systematic and fine-grained evaluation, we developed RxBench, a…

Computation and Language · Computer Science 2025-12-03 Yan Yang , Mouxiao Bian , Peiling Li , Bingjian Wen , Ruiyao Chen , Kangkun Mao , Xiaojun Ye , Tianbin Li , Pengcheng Chen , Bing Han , Jie Xu , Kaifeng Qiu , Junyan Wu

Large Language Models (LLMs) are increasingly used for clinical decision support, where hallucinations and unsafe suggestions may pose direct risks to patient safety. These risks are hard to assess: subtle clinical errors are often missed…

Computation and Language · Computer Science 2026-05-14 Yinzhu Chen , Abdine Maiga , Hossein A. Rahmani , Emine Yilmaz

This paper presents a hierarchical classification system that automatically categorizes a scholarly publication using its abstract into a three-tier hierarchical label set (discipline, field, subfield) in a multi-class setting. This system…

Digital Libraries · Computer Science 2024-07-26 Susie Xi Rao , Peter H. Egger , Ce Zhang

Understanding multi-page documents poses a significant challenge for multimodal large language models (MLLMs), as it requires fine-grained visual comprehension and multi-hop reasoning across pages. While prior work has explored…

Computer Vision and Pattern Recognition · Computer Science 2025-12-22 Junyu Xiong , Yonghui Wang , Weichao Zhao , Chenyu Liu , Bing Yin , Wengang Zhou , Houqiang Li

Trustworthiness and transparency are essential for the clinical adoption of artificial intelligence (AI) in healthcare and biomedical research. Recent deep research systems aim to accelerate evidence-grounded scientific discovery by…

Electronic Health Records (EHR) store clinical documentation as base64 encoded attachments in FHIR DocumentReference resources, which makes semantic question answering difficult. Traditional vector database methods often miss nuanced…

Computation and Language · Computer Science 2025-10-31 Tarun Kumar Chawdhury , Jon D. Duke

Large language models (LLMs) often produce unsupported or unverifiable content, known as "hallucinations." To mitigate this, retrieval-augmented LLMs incorporate citations, grounding the content in verifiable sources. Despite such…

Information Retrieval · Computer Science 2024-08-26 Weijia Zhang , Mohammad Aliannejadi , Yifei Yuan , Jiahuan Pei , Jia-Hong Huang , Evangelos Kanoulas

Information retrieval (IR) evaluation remains challenging due to incomplete IR benchmark datasets that contain unlabeled relevant chunks. While LLMs and LLM-human hybrid strategies reduce costly human effort, they remain prone to LLM…

Computation and Language · Computer Science 2026-02-09 Minjeong Ban , Jeonghwan Choi , Hyangsuk Min , Nicole Hee-Yeon Kim , Minseok Kim , Jae-Gil Lee , Hwanjun Song

The proliferation of deceptive content online necessitates robust Fake News Detection (FND) systems. While evidence-based approaches leverage external knowledge to verify claims, existing methods face critical limitations: noisy evidence…

Computation and Language · Computer Science 2025-06-16 Yuzhou Yang , Yangming Zhou , Zhiying Zhu , Zhenxing Qian , Xinpeng Zhang , Sheng Li

Large language models (LLMs) show significant potential in healthcare, prompting numerous benchmarks to evaluate their capabilities. However, concerns persist regarding the reliability of these benchmarks, which often lack clinical…

Computation and Language · Computer Science 2026-04-30 Wenting Chen , Guo Yu , Yiu-Fai Cheung , Meidan Ding , Jie Liu , Zizhan Ma , Wenxuan Wang , Linlin Shen