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It has been proven that, when normalized by $n$, the expected length of a longest common subsequence of $d$ random strings of length $n$ over an alphabet of size $\sigma$ converges to some constant that depends only on $d$ and $\sigma$.…

Data Structures and Algorithms · Computer Science 2024-07-16 George T. Heineman , Chase Miller , Daniel Reichman , Andrew Salls , Gábor Sárközy , Duncan Soiffer

The problem of approximate string matching is important in many different areas such as computational biology, text processing and pattern recognition. A great effort has been made to design efficient algorithms addressing several variants…

Data Structures and Algorithms · Computer Science 2008-07-29 Dimitris Papamichail , Georgios Papamichail

The normalized edit distance is one of the distances derived from the edit distance. It is useful in some applications because it takes into account the lengths of the two strings compared. The normalized edit distance is not defined in…

Neural and Evolutionary Computing · Computer Science 2013-12-09 Muhammad Marwan Muhammad Fuad

Given a pair of strings, the problems of computing their Longest Common Subsequence and Edit Distance have been extensively studied for decades. For exact algorithms, LCS and Edit Distance (with character insertions and deletions) are…

Data Structures and Algorithms · Computer Science 2019-04-12 Aviad Rubinstein , Zhao Song

We improve the best known upper bound on the length of the shortest reset words of synchronizing automata. The new bound is slightly better than $114 n^3 / 685 + O(n^2)$. The \v{C}ern\'y conjecture states that $(n-1)^2$ is an upper bound.…

Formal Languages and Automata Theory · Computer Science 2018-04-02 Marek Szykuła

We present an algorithm for approximating the edit distance $\operatorname{ed}(x, y)$ between two strings $x$ and $y$ in time parameterized by the degree to which one of the strings $x$ satisfies a natural pseudorandomness property. The…

Data Structures and Algorithms · Computer Science 2018-11-13 William Kuszmaul

In this paper, we study edit distance (ED) and longest common subsequence (LCS) in the asymmetric streaming model, introduced by Saks and Seshadhri [SS13]. As an intermediate model between the random access model and the streaming model,…

Data Structures and Algorithms · Computer Science 2021-10-08 Xin Li , Yu Zheng

The edit distance is a metric of dissimilarity between strings, widely applied in computational biology, speech recognition, and machine learning. Let $e_k(n)$ denote the average edit distance between random, independent strings of $n$…

Formal Languages and Automata Theory · Computer Science 2024-04-09 Gianfranco Bilardi , Michele Schimd

We present novel randomized approximation schemes for the Edit Distance (ED) problem and the Longest Common Subsequence (LCS) problem that, for any constant $\epsilon>0$, compute a $(1+\epsilon)$-approximation for ED and a…

Data Structures and Algorithms · Computer Science 2026-04-01 Xiao Mao , Aviad Rubinstein

The edit distance is a way of quantifying how similar two strings are to one another by counting the minimum number of character insertions, deletions, and substitutions required to transform one string into the other. A simple dynamic…

Computational Complexity · Computer Science 2019-10-03 Elazar Goldenberg , Robert Krauthgamer , Barna Saha

The edit distance of two strings is the minimum number of insertions, deletions, and substitutions needed to transform one string into the other. The textbook algorithm determines the edit distance of length-$n$ strings in $O(n^2)$ time,…

Data Structures and Algorithms · Computer Science 2025-02-04 Egor Gorbachev , Tomasz Kociumaka

The edit distance (a.k.a. the Levenshtein distance) between two strings is defined as the minimum number of insertions, deletions or substitutions of symbols needed to transform one string into another. The problem of computing the edit…

Computational Complexity · Computer Science 2017-08-17 Arturs Backurs , Piotr Indyk

The edit distance between two words $w_1, w_2$ is the minimal number of word operations (letter insertions, deletions, and substitutions) necessary to transform $w_1$ to $w_2$. The edit distance generalizes to languages $\mathcal{L}_1,…

Formal Languages and Automata Theory · Computer Science 2019-03-14 Krishnendu Chatterjee , Thomas A. Henzinger , Rasmus Ibsen-Jensen , Jan Otop

We present a general approach to the problem of determining tight asymptotic lower bounds for generalized central moments of the optimal alignment score of two independent sequences of i.i.d. random variables. At first, these are obtained…

Probability · Mathematics 2016-11-28 Ruoting Gong , Christian Houdré , Jüri Lember

We investigate the order of the $r$-th, $1\le r < +\infty$, central moment of the length of the longest common subsequence of two independent random words of size $n$ whose letters are identically distributed and independently drawn from a…

Probability · Mathematics 2016-04-22 Christian Houdré , Jinyong Ma

We study the problem of approximating the edit distance of two strings in sublinear time, in a setting where one or both string(s) are preprocessed, as initiated by Goldenberg, Rubinstein, Saha (STOC '20). Specifically, in the $(k, K)$-gap…

Data Structures and Algorithms · Computer Science 2022-10-13 Karl Bringmann , Alejandro Cassis , Nick Fischer , Vasileios Nakos

We consider the longest common subsequence problem in the context of subsequences with gap constraints. In particular, following Day et al. 2022, we consider the setting when the distance (i. e., the gap) between two consecutive symbols of…

Data Structures and Algorithms · Computer Science 2023-06-05 Duncan Adamson , Maria Kosche , Tore Koß , Florin Manea , Stefan Siemer

String similarity, longest common subsequence and shortest edit scripts are the triplets of problem that related to each other. There are different algorithms exist to generate edit script by solving longest common subsequence problem. This…

Data Structures and Algorithms · Computer Science 2022-08-19 P. Prakash Maria Liju

Several measures exist for string similarity, including notable ones like the edit distance and the indel distance. The former measures the count of insertions, deletions, and substitutions required to transform one string into another,…

Data Structures and Algorithms · Computer Science 2024-10-15 Sudatta Bhattacharya , Sanjana Dey , Elazar Goldenberg , Michal Koucký

In many applications, it is necessary to determine the similarity of two strings. A widely-used notion of string similarity is the edit distance: the minimum number of insertions, deletions, and substitutions required to transform one…

cmp-lg · Computer Science 2008-02-03 Eric Sven Ristad , Peter N. Yianilos
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