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A computational anatomy atlas is a set of internal organ geometries. It is based on data of real patients and complemented with virtual cases by using a some numerical approach. Atlases are in demand in computational physiology, especially…

Tissues and Organs · Quantitative Biology 2023-03-21 Konstantin Ushenin , Maksim Dzhigil , Vladislav Dordiuk

Although digital breast tomosynthesis (DBT) improves diagnostic performance over full-field digital mammography (FFDM), false-positive recalls remain a concern in breast cancer screening. We developed a multi-modal artificial intelligence…

Image and Video Processing · Electrical Eng. & Systems 2025-04-14 Jungkyu Park , Jan Witowski , Yanqi Xu , Hari Trivedi , Judy Gichoya , Beatrice Brown-Mulry , Malte Westerhoff , Linda Moy , Laura Heacock , Alana Lewin , Krzysztof J. Geras

Annotating long-horizon robotic demonstrations with precise temporal action boundaries is crucial for training and evaluating action segmentation and manipulation policy learning methods. Existing annotation tools, however, are often…

Robotics · Computer Science 2026-04-30 Sergej Stanovcic , Daniel Sliwowski , Dongheui Lee

In this study, we present a method for generating automated anatomy segmentation datasets using a sequential process that involves nnU-Net-based pseudo-labeling and anatomy-guided pseudo-label refinement. By combining various fragmented…

Image and Video Processing · Electrical Eng. & Systems 2023-07-26 Alexander Jaus , Constantin Seibold , Kelsey Hermann , Alexandra Walter , Kristina Giske , Johannes Haubold , Jens Kleesiek , Rainer Stiefelhagen

Open international challenges are becoming the de facto standard for assessing computer vision and image analysis algorithms. In recent years, new methods have extended the reach of pulmonary airway segmentation that is closer to the limit…

Purpose: To develop and validate a computer tool for automatic and simultaneous segmentation of body composition depicted on computed tomography (CT) scans for the following tissues: visceral adipose (VAT), subcutaneous adipose (SAT),…

Image and Video Processing · Electrical Eng. & Systems 2021-12-17 Lucy Pu , Syed F. Ashraf , Naciye S Gezer , Iclal Ocak , Rajeev Dhupar

Biomedical data is inherently multimodal, consisting of electronic health records, medical imaging, digital pathology, genome sequencing, wearable sensors, and more. The application of artificial intelligence tools to these multifaceted…

Machine Learning · Computer Science 2024-08-26 Shentong Mo , Paul Pu Liang

We present a novel neural network architecture called AutoAtlas for fully unsupervised partitioning and representation learning of 3D brain Magnetic Resonance Imaging (MRI) volumes. AutoAtlas consists of two neural network components: one…

Image and Video Processing · Electrical Eng. & Systems 2021-11-12 K. Aditya Mohan , Alan D. Kaplan

The ability to dynamically extend a model to new data and classes is critical for multiple organ and tumor segmentation. However, due to privacy regulations, accessing previous data and annotations can be problematic in the medical domain.…

Image and Video Processing · Electrical Eng. & Systems 2023-07-24 Yixiao Zhang , Xinyi Li , Huimiao Chen , Alan Yuille , Yaoyao Liu , Zongwei Zhou

Machine learning has been widely adopted for medical image analysis in recent years given its promising performance in image segmentation and classification tasks. As a data-driven science, the success of machine learning, in particular…

Computer Vision and Pattern Recognition · Computer Science 2020-07-06 Chengliang Dai , Shuo Wang , Yuanhan Mo , Kaichen Zhou , Elsa Angelini , Yike Guo , Wenjia Bai

Breast ultrasound (BUS) is an essential tool for diagnosing breast lesions, with millions of examinations per year. However, publicly available high-quality BUS benchmarks for AI development are limited in data scale and annotation…

Trauma is a significant cause of mortality and disability, particularly among individuals under forty. Traditional diagnostic methods for traumatic injuries, such as X-rays, CT scans, and MRI, are often time-consuming and dependent on…

Image and Video Processing · Electrical Eng. & Systems 2024-07-24 Liheng Jiang , Xuechun yang , Chang Yu , Zhizhong Wu , Yuting Wang

Deep learning techniques hold promise to develop dense topography reconstruction and pose estimation methods for endoscopic videos. However, currently available datasets do not support effective quantitative benchmarking. In this paper, we…

Fetal abdominal malformations are serious congenital anomalies that require accurate diagnosis to guide pregnancy management and reduce mortality. Although AI has demonstrated significant potential in medical diagnosis, its application to…

Computer Vision and Pattern Recognition · Computer Science 2025-07-03 Huanwen Liang , Jingxian Xu , Yuanji Zhang , Yuhao Huang , Yuhan Zhang , Xin Yang , Ran Li , Xuedong Deng , Yanjun Liu , Guowei Tao , Yun Wu , Sheng Zhao , Xinru Gao , Dong Ni

Rationale and Objectives: To develop and validate PARROT (Polyglottal Annotated Radiology Reports for Open Testing), a large, multicentric, open-access dataset of fictional radiology reports spanning multiple languages for testing natural…

Computation and Language · Computer Science 2025-08-26 Bastien Le Guellec , Kokou Adambounou , Lisa C Adams , Thibault Agripnidis , Sung Soo Ahn , Radhia Ait Chalal , Tugba Akinci D Antonoli , Philippe Amouyel , Henrik Andersson , Raphael Bentegeac , Claudio Benzoni , Antonino Andrea Blandino , Felix Busch , Elif Can , Riccardo Cau , Armando Ugo Cavallo , Christelle Chavihot , Erwin Chiquete , Renato Cuocolo , Eugen Divjak , Gordana Ivanac , Barbara Dziadkowiec Macek , Armel Elogne , Salvatore Claudio Fanni , Carlos Ferrarotti , Claudia Fossataro , Federica Fossataro , Katarzyna Fulek , Michal Fulek , Pawel Gac , Martyna Gachowska , Ignacio Garcia Juarez , Marco Gatti , Natalia Gorelik , Alexia Maria Goulianou , Aghiles Hamroun , Nicolas Herinirina , Krzysztof Kraik , Dominik Krupka , Quentin Holay , Felipe Kitamura , Michail E Klontzas , Anna Kompanowska , Rafal Kompanowski , Alexandre Lefevre , Tristan Lemke , Maximilian Lindholz , Lukas Muller , Piotr Macek , Marcus Makowski , Luigi Mannacio , Aymen Meddeb , Antonio Natale , Beatrice Nguema Edzang , Adriana Ojeda , Yae Won Park , Federica Piccione , Andrea Ponsiglione , Malgorzata Poreba , Rafal Poreba , Philipp Prucker , Jean Pierre Pruvo , Rosa Alba Pugliesi , Feno Hasina Rabemanorintsoa , Vasileios Rafailidis , Katarzyna Resler , Jan Rotkegel , Luca Saba , Ezann Siebert , Arnaldo Stanzione , Ali Fuat Tekin , Liz Toapanta Yanchapaxi , Matthaios Triantafyllou , Ekaterini Tsaoulia , Evangelia Vassalou , Federica Vernuccio , Johan Wasselius , Weilang Wang , Szymon Urban , Adrian Wlodarczak , Szymon Wlodarczak , Andrzej Wysocki , Lina Xu , Tomasz Zatonski , Shuhang Zhang , Sebastian Ziegelmayer , Gregory Kuchcinski , Keno K Bressem

Automatically identifying the structural substrates underlying cardiac abnormalities can potentially provide real-time guidance for interventional procedures. With the knowledge of cardiac tissue substrates, the treatment of complex…

Image and Video Processing · Electrical Eng. & Systems 2022-06-10 Ziyi Huang , Yu Gan , Theresa Lye , Yanchen Liu , Haofeng Zhang , Andrew Laine , Elsa Angelini , Christine Hendon

Abdominal organ segmentation from CT and MRI is an essential prerequisite for surgical planning and computer-aided navigation systems. It is challenging due to the high variability in the shape, size, and position of abdominal organs.…

Computer Vision and Pattern Recognition · Computer Science 2023-10-31 Fabian Bongratz , Anne-Marie Rickmann , Christian Wachinger

We introduce ReXGroundingCT, the first publicly available dataset linking free-text findings to pixel-level 3D segmentations in chest CT scans. The dataset includes 3,142 non-contrast chest CT scans paired with standardized radiology…

Development of artificial intelligence (AI) for medical imaging demands curation and cleaning of large-scale clinical datasets comprising hundreds of thousands of images. Some modalities, such as mammography, contain highly standardized…

Image and Video Processing · Electrical Eng. & Systems 2024-10-31 Arianna Bunnell , Kailee Hung , John A. Shepherd , Peter Sadowski