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Annotating medical images, particularly for organ segmentation, is laborious and time-consuming. For example, annotating an abdominal organ requires an estimated rate of 30-60 minutes per CT volume based on the expertise of an annotator and…

Image and Video Processing · Electrical Eng. & Systems 2025-07-09 Chongyu Qu , Tiezheng Zhang , Hualin Qiao , Jie Liu , Yucheng Tang , Alan Yuille , Zongwei Zhou

Cancers identified in CT scans are usually accompanied by detailed radiology reports, but publicly available CT datasets often lack these essential reports. This absence limits their usefulness for developing accurate report generation AI.…

Image and Video Processing · Electrical Eng. & Systems 2025-08-20 Pedro R. A. S. Bassi , Mehmet Can Yavuz , Kang Wang , Xiaoxi Chen , Wenxuan Li , Sergio Decherchi , Andrea Cavalli , Yang Yang , Alan Yuille , Zongwei Zhou

Whole abdominal organ segmentation is important in diagnosing abdomen lesions, radiotherapy, and follow-up. However, oncologists' delineating all abdominal organs from 3D volumes is time-consuming and very expensive. Deep learning-based…

Image and Video Processing · Electrical Eng. & Systems 2023-02-14 Xiangde Luo , Wenjun Liao , Jianghong Xiao , Jieneng Chen , Tao Song , Xiaofan Zhang , Kang Li , Dimitris N. Metaxas , Guotai Wang , Shaoting Zhang

AI for tumor segmentation is limited by the lack of large, voxel-wise annotated datasets, which are hard to create and require medical experts. In our proprietary JHH dataset of 3,000 annotated pancreatic tumor scans, we found that AI…

Computer Vision and Pattern Recognition · Computer Science 2025-11-04 Qi Chen , Xinze Zhou , Chen Liu , Hao Chen , Wenxuan Li , Zekun Jiang , Ziyan Huang , Yuxuan Zhao , Dexin Yu , Junjun He , Yefeng Zheng , Ling Shao , Alan Yuille , Zongwei Zhou

Existing medical imaging datasets for abdominal CT often lack three-dimensional annotations, multi-organ coverage, or precise lesion-to-organ associations, hindering robust representation learning and clinical applications. To address this…

Image and Video Processing · Electrical Eng. & Systems 2026-02-16 Mehran Advand , Zahra Dehghanian , Navid Faraji , Reza Barati , Seyed Amir Ahmad Safavi-Naini , Hamid R. Rabiee

PanTS is a large-scale, multi-institutional dataset curated to advance research in pancreatic CT analysis. It contains 36,390 CT scans from 145 medical centers, with expert-validated, voxel-wise annotations of over 993,000 anatomical…

The pre-training and fine-tuning paradigm has become prominent in transfer learning. For example, if the model is pre-trained on ImageNet and then fine-tuned to PASCAL, it can significantly outperform that trained on PASCAL from scratch.…

Image and Video Processing · Electrical Eng. & Systems 2025-01-22 Wenxuan Li , Alan Yuille , Zongwei Zhou

Despite the considerable progress in automatic abdominal multi-organ segmentation from CT/MRI scans in recent years, a comprehensive evaluation of the models' capabilities is hampered by the lack of a large-scale benchmark from diverse…

Image and Video Processing · Electrical Eng. & Systems 2022-09-05 Yuanfeng Ji , Haotian Bai , Jie Yang , Chongjian Ge , Ye Zhu , Ruimao Zhang , Zhen Li , Lingyan Zhang , Wanling Ma , Xiang Wan , Ping Luo

Quantitative organ assessment is an essential step in automated abdominal disease diagnosis and treatment planning. Artificial intelligence (AI) has shown great potential to automatize this process. However, most existing AI algorithms rely…

This systematic review critically evaluates publicly available abdominal CT datasets and their suitability for artificial intelligence (AI) applications in clinical settings. We examined 46 publicly available abdominal CT datasets (50,256…

Image and Video Processing · Electrical Eng. & Systems 2025-08-20 Saeide Danaei , Zahra Dehghanian , Elahe Meftah , Nariman Naderi , Seyed Amir Ahmad Safavi-Naini , Faeze Khorasanizade , Hamid R. Rabiee

Machine learning models for radiology benefit from large-scale data sets with high quality labels for abnormalities. We curated and analyzed a chest computed tomography (CT) data set of 36,316 volumes from 19,993 unique patients. This is…

Image and Video Processing · Electrical Eng. & Systems 2020-10-14 Rachel Lea Draelos , David Dov , Maciej A. Mazurowski , Joseph Y. Lo , Ricardo Henao , Geoffrey D. Rubin , Lawrence Carin

Accurate delineation of anatomical structures in volumetric CT scans is crucial for diagnosis and treatment planning. While AI has advanced automated segmentation, current approaches typically target individual structures, creating a…

The construction of three-dimensional multi-modal tissue maps provides an opportunity to spur interdisciplinary innovations across temporal and spatial scales through information integration. While the preponderance of effort is allocated…

Accurate fetal growth assessment from ultrasound (US) relies on precise biometry measured by manually identifying anatomical landmarks in standard planes. Manual landmarking is time-consuming, operator-dependent, and sensitive to…

Computer Vision and Pattern Recognition · Computer Science 2026-05-26 Chiara Di Vece , Zhehua Mao , Netanell Avisdris , Brian Dromey , Raffaele Napolitano , Dafna Ben Bashat , Francisco Vasconcelos , Danail Stoyanov , Leo Joskowicz , Sophia Bano

The advancement of artificial intelligence (AI) for organ segmentation and tumor detection is propelled by the growing availability of computed tomography (CT) datasets with detailed, per-voxel annotations. However, these AI models often…

Image and Video Processing · Electrical Eng. & Systems 2024-05-29 Jie Liu , Yixiao Zhang , Kang Wang , Mehmet Can Yavuz , Xiaoxi Chen , Yixuan Yuan , Haoliang Li , Yang Yang , Alan Yuille , Yucheng Tang , Zongwei Zhou

Purpose: To develop high throughput multi-label annotators for body (chest, abdomen, and pelvis) Computed Tomography (CT) reports that can be applied across a variety of abnormalities, organs, and disease states. Approach: We used a…

This study integrates PET metabolic information with CT anatomical structures to establish a 3D multimodal segmentation dataset for lymphoma based on whole-body FDG PET/CT examinations, which bridges the gap of the lack of standardised…

Image and Video Processing · Electrical Eng. & Systems 2025-12-08 Jiajun Ding , Beiyao Zhu , Xiaosheng Liu , Lishen Zhang , Zhao Liu

Being heavily reliant on animals, it is our ethical obligation to improve their well-being by understanding their needs. Several studies show that animal needs are often expressed through their faces. Though remarkable progress has been…

Computer Vision and Pattern Recognition · Computer Science 2019-09-12 Muhammad Haris Khan , John McDonagh , Salman Khan , Muhammad Shahabuddin , Aditya Arora , Fahad Shahbaz Khan , Ling Shao , Georgios Tzimiropoulos

There is a dire need for medical imaging datasets with accompanying annotations to perform downstream patient analysis. However, it is difficult to manually generate these annotations, due to the time-consuming nature, and the variability…

Image and Video Processing · Electrical Eng. & Systems 2024-06-21 Deepa Krishnaswamy , Vamsi Krishna Thiriveedhi , Cosmin Ciausu , David Clunie , Steve Pieper , Ron Kikinis , Andrey Fedorov
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