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Encoding models are used for predicting brain activity in response to sensory stimuli with the objective of elucidating how sensory information is represented in the brain. Encoding models typically comprise a nonlinear transformation of…

Neurons and Cognition · Quantitative Biology 2017-03-13 Umut Güçlü , Marcel A. J. van Gerven

This paper reviews predictive coding, from theoretical neuroscience, and variational autoencoders, from machine learning, identifying the common origin and mathematical framework underlying both areas. As each area is prominent within its…

Neural and Evolutionary Computing · Computer Science 2021-10-26 Joseph Marino

Can artificial intelligence unlock the secrets of the human brain? How do the inner mechanisms of deep learning models relate to our neural circuits? Is it possible to enhance AI by tapping into the power of brain recordings? These…

Neurons and Cognition · Quantitative Biology 2024-12-31 Subba Reddy Oota , Zijiao Chen , Manish Gupta , Raju S. Bapi , Gael Jobard , Frederic Alexandre , Xavier Hinaut

Positional encodings enable Transformers to incorporate sequential information, yet their theoretical understanding remains limited to two properties: distance attenuation and translation invariance. Because natural language lacks purely…

Machine Learning · Computer Science 2026-02-11 Zihan Gu , Ruoyu Chen , Han Zhang , Hua Zhang , Yue Hu

Large Language Models (LLMs) encode factual knowledge within hidden parametric spaces that are difficult to inspect or control. While Sparse Autoencoders (SAEs) can decompose hidden activations into more fine-grained, interpretable…

Machine Learning · Computer Science 2026-01-14 Minglai Yang , Xinyu Guo , Zhengliang Shi , Jinhe Bi , Steven Bethard , Mihai Surdeanu , Liangming Pan

We evaluate LLMs' language understanding capacities on simple inference tasks that most humans find trivial. Specifically, we target (i) grammatically-specified entailments, (ii) premises with evidential adverbs of uncertainty, and (iii)…

Computation and Language · Computer Science 2024-04-12 Victoria Basmov , Yoav Goldberg , Reut Tsarfaty

Autoregressive language models have demonstrated a remarkable ability to extract latent structure from text. The embeddings from large language models have been shown to capture aspects of the syntax and semantics of language. But what…

Machine Learning · Computer Science 2026-01-09 Liyi Zhang , Michael Y. Li , R. Thomas McCoy , Theodore R. Sumers , Jian-Qiao Zhu , Thomas L. Griffiths

Other than vector representations, the direct objects of human cognition are generally high-order tensors, such as 2D images and 3D textures. From this fact, two interesting questions naturally arise: How does the human brain represent…

Machine Learning · Computer Science 2013-06-13 Guoqiang Zhong , Mohamed Cheriet

A major challenge in computational chemistry is the generation of novel molecular structures with desirable pharmacological and physiochemical properties. In this work, we investigate the potential use of autoencoder, a deep learning…

Machine Learning · Computer Science 2017-11-22 Thomas Blaschke , Marcus Olivecrona , Ola Engkvist , Jürgen Bajorath , Hongming Chen

The goal of this work is to address two limitations in autoencoder-based models: latent space interpretability and compatibility with unstructured meshes. This is accomplished here with the development of a novel graph neural network (GNN)…

Machine Learning · Computer Science 2023-02-20 Shivam Barwey , Varun Shankar , Venkatasubramanian Viswanathan , Romit Maulik

Interpretability is essential in medical imaging to ensure that clinicians can comprehend and trust artificial intelligence models. Several approaches have been recently considered to encode attributes in the latent space to enhance its…

Image and Video Processing · Electrical Eng. & Systems 2024-08-27 Maxime Di Folco , Cosmin I. Bercea , Emily Chan , Julia A. Schnabel

Sentence and word embeddings encode structural and semantic information in a distributed manner. Part of the information encoded -- particularly lexical information -- can be seen as continuous, whereas other -- like structural information…

Computation and Language · Computer Science 2023-12-19 Vivi Nastase , Paola Merlo

Data generated by edge devices has the potential to train intelligent autonomous systems across various domains. Despite the emergence of diverse machine learning approaches addressing privacy concerns and utilizing distributed data,…

Machine Learning · Computer Science 2024-03-12 Adarsh N L , Arun P , Alok Porwal , Malcolm Aranha

Masked Autoencoders (MAEs) achieve impressive performance in image classification tasks, yet the internal representations they learn remain less understood. This work started as an attempt to understand the strong downstream classification…

Machine Learning · Computer Science 2026-02-04 Anika Shrivastava , Renu Rameshan , Samar Agnihotri

One of the main methods for computational interpretation of a text is mapping it into a vector in some embedding space. Such vectors can then be used for a variety of textual processing tasks. Recently, most embedding spaces are a product…

Computation and Language · Computer Science 2023-11-10 Adi Simhi , Shaul Markovitch

Machine learning models provide statistically impressive results which might be individually unreliable. To provide reliability, we propose an Epistemic Classifier (EC) that can provide justification of its belief using support from the…

Machine Learning · Computer Science 2020-10-20 Chitresh Bhushan , Zhaoyuan Yang , Nurali Virani , Naresh Iyer

A central idea in understanding brains and building artificial intelligence is that structure determines function. Yet, how the brain's complex structure arises from a limited set of genetic instructions remains a key question. The ultra…

Neurons and Cognition · Quantitative Biology 2026-01-28 Xingyu Liu , Yubin Li , Guozhang Chen

Autoencoders, which consist of an encoder and a decoder, are widely used in machine learning for dimension reduction of high-dimensional data. The encoder embeds the input data manifold into a lower-dimensional latent space, while the…

Numerical Analysis · Mathematics 2024-03-29 Juliane Braunsmann , Marko Rajković , Martin Rumpf , Benedikt Wirth

Learning on synthetic data and transferring the resulting properties to their real counterparts is an important challenge for reducing costs and increasing safety in machine learning. In this work, we focus on autoencoder architectures and…

Computer Vision and Pattern Recognition · Computer Science 2022-04-04 Steve Dias Da Cruz , Bertram Taetz , Thomas Stifter , Didier Stricker

In this paper, we investigate the usage of autoencoders in modeling textual data. Traditional autoencoders suffer from at least two aspects: scalability with the high dimensionality of vocabulary size and dealing with task-irrelevant words.…

Machine Learning · Computer Science 2015-12-15 Shuangfei Zhai , Zhongfei Zhang