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Making data compliant with the FAIR Data principles (Findable, Accessible, Interoperable, Reusable) is still a challenge for many researchers, who are not sure which criteria should be met first and how. Illustrated from experimental data…

Other Quantitative Biology · Quantitative Biology 2020-12-18 Daniel Jacob , Romain David , Sophie Aubin , Yves Gibon

Reproducibility is a cornerstone of science. FAIR (findable, accessible, interoperable, and reusable) data is often a vital step towards testing the reproducibility of results. The implementation of FAIR principles in the astrophysical…

Instrumentation and Methods for Astrophysics · Physics 2026-02-10 Susanne Pfalzner , Stephan Hachinger , Jolanta Zjupa , Salvatore Cielo , Frank W. Wagner , Marcus Brüggen , Annika Hagemeier

Computational workflows represent major investments of effort and expertise. As first-class, publishable research objects of their own, they are key to sharing methodological know-how for reuse, reproducibility, and transparency. Thus, the…

A foundational set of findable, accessible, interoperable, and reusable (FAIR) principles were proposed in 2016 as prerequisites for proper data management and stewardship, with the goal of enabling the reusability of scholarly data. The…

It is challenging to determine whether datasets are findable, accessible, interoperable, and reusable (FAIR) because the FAIR Guiding Principles refer to highly idiosyncratic criteria regarding the metadata used to annotate datasets.…

Digital Libraries · Computer Science 2022-10-17 Mark A. Musen , Martin J. O'Connor , Erik Schultes , Marcos Martinez-Romero , Josef Hardi , John Graybeal

Recent trends within computational and data sciences show an increasing recognition and adoption of computational workflows as tools for productivity and reproducibility that also democratize access to platforms and processing know-how. As…

In recent years, digital object management practices to support findability, accessibility, interoperability, and reusability (FAIR) have begun to be adopted across a number of data-intensive scientific disciplines. These digital objects…

High Energy Physics - Experiment · Physics 2022-11-29 Avik Roy

The FAIR principles for scientific data (Findable, Accessible, Interoperable, Reusable) are also relevant to other digital objects such as research software and scientific workflows that operate on scientific data. The FAIR principles can…

Digital Libraries · Computer Science 2022-12-16 Sean R. Wilkinson , Greg Eisenhauer , Anuj J. Kapadia , Kathryn Knight , Jeremy Logan , Patrick Widener , Matthew Wolf

To enable materials databases supporting computational and experimental research, it is critical to develop platforms that both facilitate access to the data and provide the tools used to generate/analyze it - all while considering the…

The FAIR Principles aim to make data and knowledge Findable, Accessible, Interoperable, and Reusable, yet current digital infrastructures often lack a unifying semantic framework that bridges human cognition and machine-actionability. In…

Databases · Computer Science 2025-10-01 Lars Vogt , Barend Mons

Molecular dynamics (MD) has become a powerful tool for studying biophysical systems, due to increasing computational power and availability of software. Although MD has made many contributions to better understanding these complex…

Computational Physics · Physics 2019-09-27 Yihang Wang , Joao Marcelo Lamim Ribeiro , Pratyush Tiwary

Scientific data management is at a critical juncture, driven by exponential data growth, increasing cross-domain dependencies, and a severe reproducibility crisis in modern research. Traditional centralized data management approaches are…

Databases · Computer Science 2025-04-30 Sebastian Beyvers , Jannis Hochmuth , Lukas Brehm , Maria Hansen , Alexander Goesmann , Frank Förster

Mechanical and thermodynamic properties, including the influence of crystal defects, are critical for evaluating materials in engineering applications. Molecular dynamics simulations provide valuable insight into these mechanisms at the…

Since their proposal in 2016, the FAIR principles have been largely discussed by different communities and initiatives involved in the development of infrastructures to enhance support for data findability, accessibility, interoperability,…

Systems composed of soft matter (e.g., liquids, polymers, foams, gels, colloids, and most biological materials) are ubiquitous in science and engineering, but molecular simulations of such systems pose particular computational challenges,…

Molecular dynamics (MD) simulations have become popular in materials science, biochemistry, biophysics and several other fields. Improvements in computational resources, in quality of force field parameters and algorithms have yielded…

Soft Condensed Matter · Physics 2016-11-28 Jirasak Wong-ekkabut , Mikko Karttunen

Molecular dynamics (MD) simulations are used in biochemistry, physics, and other fields to study the motions, thermodynamic properties, and the interactions between molecules. Computational limitations and the complexity of these problems,…

Numerical Analysis · Mathematics 2018-01-17 F. Grogan , M. Holst , L. Lindblom , R. Amaro

The materials science community seeks to support the FAIR principles for computational simulation research. The MatCore Project was recently launched to address this need, with the goal of developing an overall metadata framework and…

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