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The recent reconstruction of the Drosophila brain provides a neural network of unprecedented size and level of details. In this work, we study the geometrical properties of this system by applying network embedding techniques to the graph…

Physics and Society · Physics 2026-02-19 Bendegúz Sulyok , Sámuel G. Balogh , Gergely Palla

Connectomes are spatially embedded networks whose architecture has been shaped by physical constraints and communication needs throughout evolution. Using a decentralized navigation protocol, we investigate the relationship between the…

Neurons and Cognition · Quantitative Biology 2020-02-07 Antoine Allard , M. Ángeles Serrano

Learning low-dimensional numerical representations from symbolic data, e.g., embedding the nodes of a graph into a geometric space, is an important concept in machine learning. While embedding into Euclidean space is common, recent…

Machine Learning · Computer Science 2024-10-10 Thomas Bläsius , Jean-Pierre von der Heydt , Maximilian Katzmann , Nikolai Maas

Signed network embedding methods aim to learn vector representations of nodes in signed networks. However, existing algorithms only managed to embed networks into low-dimensional Euclidean spaces whereas many intrinsic features of signed…

Machine Learning · Computer Science 2021-07-16 Wenzhuo Song , Hongxu Chen , Xueyan Liu , Hongzhe Jiang , Shengsheng Wang

Learning graph representations via low-dimensional embeddings that preserve relevant network properties is an important class of problems in machine learning. We here present a novel method to embed directed acyclic graphs. Following prior…

Machine Learning · Computer Science 2018-06-08 Octavian-Eugen Ganea , Gary Bécigneul , Thomas Hofmann

Recently, there has been an interest in embedding networks in hyperbolic space, since hyperbolic space has been shown to work well in capturing graph/network structure as it can naturally reflect some properties of complex networks.…

Social and Information Networks · Computer Science 2020-11-04 Lili Wang , Ying Lu , Chenghan Huang , Soroush Vosoughi

Hyperbolic geometry has emerged as a powerful tool for modeling complex, structured data, particularly where hierarchical or tree-like relationships are present. By enabling embeddings with lower distortion, hyperbolic neural networks offer…

Machine Learning · Computer Science 2025-06-18 Pol Arévalo , Alexis Molina , Álvaro Ciudad

The human brain displays a complex network topology, whose structural organization is widely studied using diffusion tensor imaging. The original geometry from which emerges the network topology is known, as well as the localization of the…

Graph representation learning in Euclidean space, despite its widespread adoption and proven utility in many domains, often struggles to effectively capture the inherent hierarchical and complex relational structures prevalent in real-world…

Machine Learning · Computer Science 2025-08-26 Menglin Yang , Min Zhou , Tong Zhang , Jiahong Liu , Zhihao Li , Lujia Pan , Hui Xiong , Irwin King

Foundation models pre-trained on massive datasets, including large language models (LLMs), vision-language models (VLMs), and large multimodal models, have demonstrated remarkable success in diverse downstream tasks. However, recent studies…

Machine Learning · Computer Science 2025-07-25 Neil He , Hiren Madhu , Ngoc Bui , Menglin Yang , Rex Ying

Multilayer networks offer a powerful framework for modeling complex systems across diverse domains, effectively capturing multiple types of connections and interdependent subsystems commonly found in real world scenarios. To analyze these…

Social and Information Networks · Computer Science 2026-02-20 Martin Guillemaud , Vera Dinkelacker , Mario Chavez

Graph convolutional neural networks (GCNs) embed nodes in a graph into Euclidean space, which has been shown to incur a large distortion when embedding real-world graphs with scale-free or hierarchical structure. Hyperbolic geometry offers…

Machine Learning · Computer Science 2019-10-30 Ines Chami , Rex Ying , Christopher Ré , Jure Leskovec

Hyperbolic geometry has emerged as an effective latent space for representing complex networks, owing to its ability to capture hierarchical organization and heterogeneous connectivity patterns using low-dimensional embeddings. As a result,…

Machine Learning · Computer Science 2026-05-01 Sofía Pérez Casulo , Marcelo Fiori , Bernardo Marenco , Federico Larroca

Deep Learning is mostly responsible for the surge of interest in Artificial Intelligence in the last decade. So far, deep learning researchers have been particularly successful in the domain of image processing, where Convolutional Neural…

Machine Learning · Computer Science 2023-08-31 Andrii Skliar , Maurice Weiler

Hyperbolic spaces have recently gained momentum in the context of machine learning due to their high capacity and tree-likeliness properties. However, the representational power of hyperbolic geometry is not yet on par with Euclidean…

Machine Learning · Computer Science 2018-06-29 Octavian-Eugen Ganea , Gary Bécigneul , Thomas Hofmann

Neural embeddings have been used with great success in Natural Language Processing (NLP). They provide compact representations that encapsulate word similarity and attain state-of-the-art performance in a range of linguistic tasks. The…

Machine Learning · Statistics 2018-09-20 Benjamin Paul Chamberlain , James Clough , Marc Peter Deisenroth

Hyperbolic neural networks have been popular in the recent past due to their ability to represent hierarchical data sets effectively and efficiently. The challenge in developing these networks lies in the nonlinearity of the embedding space…

Machine Learning · Computer Science 2021-12-08 Xiran Fan , Chun-Hao Yang , Baba C. Vemuri

Hyperbolic space and hyperbolic embeddings are becoming a popular research field for recommender systems. However, it is not clear under what circumstances the hyperbolic space should be considered. To fill this gap, This paper provides…

Information Retrieval · Computer Science 2022-01-26 Sixiao Zhang , Hongxu Chen , Xiao Ming , Lizhen Cui , Hongzhi Yin , Guandong Xu

The embedding of complex networks into metric spaces has become a research topic of high interest with a wide variety of proposed methods. Low dimensional hyperbolic spaces offer a natural co-domain for embeddings allowing a roughly uniform…

Physics and Society · Physics 2024-10-07 Sámuel G. Balogh , Bendegúz Sulyok , Tamás Vicsek , Gergely Palla

Recent research in representation learning has shown that hierarchical data lends itself to low-dimensional and highly informative representations in hyperbolic space. However, even if hyperbolic embeddings have gathered attention in image…

Computer Vision and Pattern Recognition · Computer Science 2023-09-20 Gabriel Moreira , Manuel Marques , João Paulo Costeira , Alexander Hauptmann
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