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Transformers generate valid and diverse chemical structures, but little is known about the mechanisms that enable these models to capture the rules of molecular representation. We present a mechanistic analysis of autoregressive…

Machine Learning · Computer Science 2025-12-11 Kristof Varadi , Mark Marosi , Peter Antal

The rapid discovery of new chemical compounds is essential for advancing global health and developing treatments. While generative models show promise in creating novel molecules, challenges remain in ensuring the real-world applicability…

Biomolecules · Quantitative Biology 2025-09-29 Onur Boyar , Hiroyuki Hanada , Ichiro Takeuchi

Modern Latent Diffusion Models (LDMs) typically operate in low-level Variational Autoencoder (VAE) latent spaces that are primarily optimized for pixel-level reconstruction. To unify vision generation and understanding, a burgeoning trend…

Computer Vision and Pattern Recognition · Computer Science 2025-12-22 Shilong Zhang , He Zhang , Zhifei Zhang , Chongjian Ge , Shuchen Xue , Shaoteng Liu , Mengwei Ren , Soo Ye Kim , Yuqian Zhou , Qing Liu , Daniil Pakhomov , Kai Zhang , Zhe Lin , Ping Luo

Current language models decode text token by token according to probabilistic distribution, and determining the appropriate candidates for the next token is crucial to ensure generation quality. This study introduces adaptive decoding, a…

Computation and Language · Computer Science 2024-06-04 Wenhong Zhu , Hongkun Hao , Zhiwei He , Yiming Ai , Rui Wang

We propose an end-to-end, domain-independent neural encoder-aligner-decoder model for selective generation, i.e., the joint task of content selection and surface realization. Our model first encodes a full set of over-determined database…

Computation and Language · Computer Science 2016-01-12 Hongyuan Mei , Mohit Bansal , Matthew R. Walter

Powerful generative models, particularly in Natural Language Modelling, are commonly trained by maximizing a variational lower bound on the data log likelihood. These models often suffer from poor use of their latent variable, with ad-hoc…

Machine Learning · Statistics 2018-06-13 Alex Mansbridge , Roberto Fierimonte , Ilya Feige , David Barber

Developing machine learning interatomic potentials (MLIPs) for complex materials systems remains challenging because it requires expertise in atomistic simulations, machine learning, and workflow design, as well as iterative active learning…

Machine Learning · Computer Science 2026-05-15 Wenwen Li , Yuki Orimo , Nontawat Charoenphakdee

Majority voting over multiple LLM attempts improves mathematical reasoning, but correlated errors limit the effective sample size. A natural fix is to assign different reasoning strategies to different voters. The approach, Diverse Prompt…

Computation and Language · Computer Science 2026-04-17 Natapong Nitarach

Optimization in the latent space of variational autoencoders is a promising approach to generate high-dimensional discrete objects that maximize an expensive black-box property (e.g., drug-likeness in molecular generation, function…

Machine Learning · Computer Science 2021-07-02 Pascal Notin , José Miguel Hernández-Lobato , Yarin Gal

To ensure that text generated by large language models (LLMs) is in an expected format, constrained decoding proposes to enforce strict formal language constraints during generation. However, as we show in this work, not only do such…

Machine Learning · Computer Science 2024-03-13 Luca Beurer-Kellner , Marc Fischer , Martin Vechev

Learned progressive image compression is gaining momentum as it allows improved image reconstruction as more bits are decoded at the receiver. We propose a progressive image compression method in which an image is first represented as a…

Computer Vision and Pattern Recognition · Computer Science 2025-01-13 Alberto Presta , Enzo Tartaglione , Attilio Fiandrotti , Marco Grangetto , Pamela Cosman

Designing controllers for complex industrial electronic systems is challenging due to nonlinearities and parameter uncertainties, and traditional methods are often slow and costly. To address this, we propose a novel autonomous design…

Systems and Control · Electrical Eng. & Systems 2025-07-23 Chenggang Cui , Jiaming Liu , Peifeng Hui , Pengfeng Lin , Chuanlin Zhang

In this paper we aim to investigate the mechanisms that guide text generation with pre-trained Transformer-based Language Models (TLMs). Grounded on the Product of Experts formulation by Hinton (1999), we describe a generative mechanism…

Computation and Language · Computer Science 2023-06-16 Xavier Suau , Luca Zappella , Nicholas Apostoloff

Next-generation Multiple-Input Multiple-Output (MIMO) is expected to be intelligent and scalable. In this paper, we study Large Language Model (LLM)-enabled next-generation MIMO networks. Firstly, we provide an overview of the development,…

Networking and Internet Architecture · Computer Science 2025-11-11 Zhe Wang , Jiayi Zhang , Hongyang Du , Ruichen Zhang , Dusit Niyato , Bo Ai , Khaled B. Letaief

Generating as diverse molecules as possible with desired properties is crucial for drug discovery research, which invokes many approaches based on deep generative models today. Despite recent advancements in these models, particularly in…

Machine Learning · Computer Science 2024-07-17 Changhun Lee , Gyumin Lee

This paper develops a generative deep learning model for the synthesis of multiple-input multiple-output (MIMO) active sensing waveforms with desired properties, including constant modulus and a user-defined beampattern. The proposed…

Signal Processing · Electrical Eng. & Systems 2024-12-31 Vesa Saarinen , Robin Rajamäki , Visa Koivunen

Noting the importance of the latent variables in inference and learning, we propose a novel framework for autoencoders based on the homeomorphic transformation of latent variables, which could reduce the distance between vectors in the…

Machine Learning · Computer Science 2019-06-04 Jaehoon Cha , Kyeong Soo Kim , Sanghyuk Lee

Stochastic Interpolants (SI) is a powerful framework for generative modeling, capable of flexibly transforming between two probability distributions. However, its use in jointly optimized latent variable models remains unexplored as it…

Machine Learning · Computer Science 2026-04-23 Saurabh Singh , Dmitry Lagun

Text-to-image generation has evolved beyond single monolithic models to complex multi-component pipelines. These combine fine-tuned generators, adapters, upscaling blocks and even editing steps, leading to significant improvements in image…

Computer Vision and Pattern Recognition · Computer Science 2025-11-04 Uri Gadot , Rinon Gal , Yftah Ziser , Gal Chechik , Shie Mannor

Generative recommendation systems, driven by large language models (LLMs), present an innovative approach to predicting user preferences by modeling items as token sequences and generating recommendations in a generative manner. A critical…