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Interactions in natural communities can be highly heterogeneous, with any given species interacting appreciably with only some of the others, a situation commonly represented by sparse interaction networks. We study the consequences of…

Populations and Evolution · Quantitative Biology 2022-10-12 Stav Marcus , Ari M. Turner , Guy Bunin

Self-organized spatial patterns of vegetation are frequent in drylands and, because pattern shape correlates with water availability, they have been suggested as important indicators of ecosystem health. However, the mechanisms underlying…

Interactions between neighboring cells are essential for generating or refining patterns in a number of biological systems. We propose a discrete filtering approach to predict how networks of cells modulate spatially varying input signals…

Tissues and Organs · Quantitative Biology 2019-02-14 Melinda Liu Perkins , Murat Arcak

The relative balance between physics and data within any physics-informed machine learner is an important modelling consideration to ensure that the benefits of both physics and data-based approaches are maximised. An over reliance on…

Machine Learning · Computer Science 2025-06-16 Daniel James Pitchforth , Matthew Rhys Jones , Samuel John Gibson , Elizabeth Jane Cross

Interacting individuals in complex systems often give rise to coherent motion exhibiting coordinated global structures. Such phenomena are ubiquitously observed in nature, from cell migration, bacterial swarms, animal and insect groups, and…

Neural and Evolutionary Computing · Computer Science 2024-07-17 Dongjo Kim , Jeongsu Lee , Ho-Young Kim

This contribution identifies and characterizes a previously unrecognized boundary--layer structure that occurs in the context of linear transport theory, with an impact on the fields of Radiative Transfer and Neutron Transport. The…

Materials Science · Physics 2021-09-29 E. L. Gaggioli , D. M. Mitnik , O. P. Bruno

In a mathematical model of interacting biological organisms, where external interventions may alter behavior over time, traditional models that assume fixed parameters usually do not capture the evolving dynamics. In oncology, this is…

Machine Learning · Computer Science 2025-12-18 Kayode Olumoyin , Lamees El Naqa , Katarzyna Rejniak

Recent empirical studies using large-scale data sets have validated the Granovetter hypothesis on the structure of the society in that there are strongly wired communities connected by weak ties. However, as interaction between individuals…

Physics and Society · Physics 2014-11-26 Yohsuke Murase , János Török , Hang-Hyun Jo , Kimmo Kaski , János Kertész

The margins within the geographic range of species are often specific in terms of ecological and evolutionary processes, and can strongly influence the species' reaction to climate change. One of the frequently observed features at range…

Populations and Evolution · Quantitative Biology 2020-02-28 R. Juhász , B. Oborny

We study the statistics of ecosystems with a variable number of co-evolving species. The species interact in two ways: by prey-predator relationships and by direct competition with similar kinds. The interaction coefficients change slowly…

Adaptation and Self-Organizing Systems · Physics 2015-06-26 Michael Lassig , Ugo Bastolla , Susanna C. Manrubia , Angelo Valleriani

Mutualistic networks provide a powerful way to describe and analyse plant-pollinator communities and their structure over time. While these networks capture the complex interdependencies that link population fates across the season, they…

Physics and Society · Physics 2026-04-09 Tom Clegg , Thilo Gross

An ecological network is a formal representation of a specific type of interaction in a corresponding ecosystem. Such networks have traditionally been modelled as encoding exclusively pairwise interactions among the fundamental units of…

Algebraic Topology · Mathematics 2022-03-28 Udit Raj , Shashankaditya Upadhyay , Moumita Karmakar , Sudeepto Bhattacharya

This paper investigates causal influences between agents linked by a social graph and interacting over time. In particular, the work examines the dynamics of social learning models and distributed decision-making protocols, and derives…

Social and Information Networks · Computer Science 2026-05-19 Mert Kayaalp , Ali H. Sayed

Recent technological advances and long-term data studies provide interaction data that can be modelled through dynamic networks, i.e a sequence of different snapshots of an evolving ecological network. Most often time is the parameter along…

Populations and Evolution · Quantitative Biology 2017-01-06 Vincent Miele , Catherine Matias

Evolutionary adaptation is the process that increases the fit of a population to the fitness landscape it inhabits. As a consequence, evolutionary dynamics is shaped, constrained, and channeled, by that fitness landscape. Much work has been…

Populations and Evolution · Quantitative Biology 2010-12-17 Bjørn Østman , Arend Hintze , Christoph Adami

Geographic borders are not only essential for the effective functioning of government, the distribution of administrative responsibilities and the allocation of public resources, they also influence the interregional flow of information,…

Physics and Society · Physics 2011-03-30 C. Thiemann , F. Theis , D. Grady , R. Brune , D. Brockmann

The significant role of space in maintaining species coexistence and determining community structure and function is well established. However, community ecology studies have mainly focused on simple competition and predation systems, and…

Populations and Evolution · Quantitative Biology 2010-08-09 Elise Filotas , Martin Grant , Lael Parrott , Per Arne Rikvold

Percolation theory has been widely used to study phase transitions in complex networked systems. It has also successfully explained several macroscopic phenomena across different fields. Yet, the existent theoretical framework for…

Physics and Society · Physics 2020-12-01 Jiarong Xie , Xiangrong Wang , Ling Feng , Jin-Hua Zhao , Yamir Moreno , Yanqing Hu

Interactions play a key role in understanding objects and scenes, for both virtual and real world agents. We introduce a new general representation for proximal interactions among physical objects that is agnostic to the type of objects or…

Mediation analysis aims to decipher the underlying causal mechanisms between an exposure, an outcome, and intermediate variables called mediators. Initially developed for fixed-time mediator and outcome, it has been extended to the…

Methodology · Statistics 2025-01-15 K. Le Bourdonnec , L. Valeri , C. Proust-Lima
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