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Complex networks hosting binary-state dynamics arise in a variety of contexts. In spite of previous works, to fully reconstruct the network structure from observed binary data remains to be challenging. We articulate a statistical inference…

Physics and Society · Physics 2018-03-14 Chuang Ma , Han-Shuang Chen , Ying-Cheng Lai , Hai-Feng Zhang

In this paper we obtained the formula for the number of irreducible polynomials with degree $n$ over finite fields of characteristic two with given trace and subtrace. This formula is a generalization of the result of Cattell et al.(2003)…

Number Theory · Mathematics 2014-07-02 Won-Ho Ri , Gum-Chol Myong , Ryul Kim , Chang-Il Rim

Markov random fields are used to model high dimensional distributions in a number of applied areas. Much recent interest has been devoted to the reconstruction of the dependency structure from independent samples from the Markov random…

Computational Complexity · Computer Science 2010-03-09 Guy Bresler , Elchanan Mossel , Allan Sly

Track reconstruction in high track multiplicity environments at current and future high rate particle physics experiments is a big challenge and very time consuming. The search for track seeds and the fitting of track candidates are usually…

Instrumentation and Detectors · Physics 2016-12-21 Andre Schöning

Reconciling gene trees with a species tree is a fundamental problem to understand the evolution of gene families. Many existing approaches reconcile each gene tree independently. However, it is well-known that the evolution of gene families…

Populations and Evolution · Quantitative Biology 2018-06-12 Riccardo Dondi , Manuel Lafond , Celine Scornavacca

We present an algorithm that, with high probability, generates a random spanning tree from an edge-weighted undirected graph in $\tilde{O}(n^{4/3}m^{1/2}+n^{2})$ time (The $\tilde{O}(\cdot)$ notation hides $\operatorname{polylog}(n)$…

Data Structures and Algorithms · Computer Science 2017-06-22 David Durfee , Rasmus Kyng , John Peebles , Anup B. Rao , Sushant Sachdeva

An important problem of reconstruction of diffusion network and transmission probabilities from the data has attracted a considerable attention in the past several years. A number of recent papers introduced efficient algorithms for the…

Physics and Society · Physics 2015-09-24 Andrey Y. Lokhov , Theodor Misiakiewicz

We study the uniqueness and accuracy of the numerical solution of the problem of reconstruction of the shape and trajectory of a reflecting obstacle moving in an inhomogeneous medium from travel times, start and end points, and initial…

Data Structures and Algorithms · Computer Science 2014-01-17 Kamen M. Lozev

Nanopore sequencers are emerging as promising new platforms for high-throughput sequencing. As with other technologies, sequencer errors pose a major challenge for their effective use. In this paper, we present a novel information theoretic…

Information Theory · Computer Science 2016-01-12 Jarek Duda , Wojciech Szpankowski , Ananth Grama

This paper deals with developing techniques for the reconstruction of high-dimensional datasets given each bivariate projection, as would be found in a matrix scatterplot. A graph-based solution is introduced, involving clique-finding,…

Machine Learning · Computer Science 2023-12-27 Eli Dugan , Klaus Mueller

A classical theorem of Wendroff shows that one may reconstructs a sequence of orthogonal polynomials on the real line from two non-constant polynomials of consecutive degrees whose zeros strictly interlace on the real line. In this note we…

Classical Analysis and ODEs · Mathematics 2026-02-25 K. Castillo , G. Gordillo-Núñez

Given an $H$-minor-free graph $G$ and an integer $k$, our main technical contribution is sampling in randomized polynomial time an induced subgraph $G'$ of $G$ and a tree decomposition of $G'$ of width $\widetilde{O}(k)$ such that for every…

Data Structures and Algorithms · Computer Science 2026-04-01 Dániel Marx , Marcin Pilipczuk , Michał Pilipczuk

Loop under-approximation is a technique that enriches C programs with additional branches that represent the effect of a (limited) range of loop iterations. While this technique can speed up the detection of bugs significantly, it…

Formal Languages and Automata Theory · Computer Science 2014-10-22 Daniel Kroening , Matt Lewis , Georg Weissenbacher

Phase retrieval is a nonlinear inverse problem that arises in a wide range of imaging modalities, from electron microscopy to Fourier ptychography. In particular, the reconstruction is facilitated when the sensing matrix is i.i.d. random,…

The goal of this thesis is to improve our understanding of the internal mechanisms by which deep artificial neural networks create meaningful representations and are able to generalize. We focus on the challenge of characterizing the…

Machine Learning · Computer Science 2025-10-29 Diego Doimo

Recently designed biomolecular approaches to build single chain polypeptide polyhedra as molecular origami nanostructures have risen high interest in various double traces of the underlying graphs of these polyhedra. Double traces are walks…

Combinatorics · Mathematics 2018-08-28 Nino Bašić , Drago Bokal , Tomas Boothby , Jernej Rus

We provide a unified method to study the adjacency matrices of regular graphs (including infinite ones) using holomorphic functional calculus. By applying this calculus on a specific ellipse that contains the spectrum, we derive an…

Combinatorics · Mathematics 2026-01-28 Yulin Gong , Wenbo Li , Shiping Liu

Network topology plays a key role in many phenomena, from the spreading of diseases to that of financial crises. Whenever the whole structure of a network is unknown, one must resort to reconstruction methods that identify the least biased…

Data Analysis, Statistics and Probability · Physics 2015-06-09 Rossana Mastrandrea , Tiziano Squartini , Giorgio Fagiolo , Diego Garlaschelli

Reconstructing continuous signals from a small number of discrete samples is a fundamental problem across science and engineering. In practice, we are often interested in signals with 'simple' Fourier structure, such as bandlimited,…

Data Structures and Algorithms · Computer Science 2018-12-24 Haim Avron , Michael Kapralov , Cameron Musco , Christopher Musco , Ameya Velingker , Amir Zandieh

Let $K$ be a finite simplicial, cubical, delta or CW complex. The persistence map $\mathrm{PH}$ takes a filter $f:K \rightarrow \mathbb{R}$ as input and returns the barcodes $\mathrm{PH}(f)$ of the associated sublevel set persistent…

Computational Geometry · Computer Science 2021-10-29 Jacob Leygonie , Gregory Henselman-Petrusek