Related papers: Helicity modulus in the bilayer XY model by worm a…
In isotropic helical turbulence, a new single helical model is suggested for large eddy simulation. Based on the Kolmogrov's hypotheses, the helical model is proposed according to the balance of helicity dissipation and the average of…
A new flamelet model is developed for sub-grid modeling and coupled with the resolved flow for turbulent combustion. The model differs from current models in critical ways. (i) Non-premixed flames, premixed flames, or multi-branched flame…
The invaded cluster algorithm is used to study the XY model in two and three dimensions up to sizes 2000^2 and 120^3 respectively. A soft spin O(2) model, in the same universality class as the 3D XY model, is also studied. The static…
We study the magnetic susceptibility of 1D quantum XY model, and show that when the temperature approaches zero, the magnetic susceptibility exhibits the finite-temperature scaling behavior. This scaling behavior of the magnetic…
We present the results of a study of the three-dimensional $XY$-model on a simple cubic lattice using the single cluster updating algorithm combined with improved estimators. We have measured the susceptibility and the correlation length…
In this paper we present the results of a large-scale numerical investigation of structural properties of a model of cell membrane, simulated as a bilayer of flexible molecules in vacuum. The study was performed by carrying out extensive…
The shear modulus of solid 4He below 200 mK exhibits an unusual increase, the characteristics of which show remarkable similarities to those of the period reduction in torsional oscillator experiments. We systematically studied the drive…
The kinetic behavior of a three-dimensional off-lattice heteropolymer model is studied in terms of the time dependence of the average mean-square displacement between configurations. It is found that at short time-scales similar behavior is…
The red blood cell (RBC) membrane is composed of a lipid bilayer and a cytoskeleton interconnected by protein junction complexes, allowing for potential sliding between the lipid bilayer and the cytoskeleton. Despite this biological…
Very thin elastic sheets, even at zero temperature, exhibit nonlinear elastic response by virtue of their dominant bending modes. Their behavior is even richer at finite temperature. Here we use molecular dynamics (MD) to study the…
Background: Many attempts have been made to resolve in time the folding of model proteins in computer simulations. Different computational approaches have emerged. Some of these approaches suffer from the insensitivity to the geometrical…
It has long been suggested that the mid-latitude atmospheric circulation possesses what has come to be known as `weather regimes', loosely categorised as regions of phase space with above-average density and/or extended persistence. Their…
We calculate the geometric phase for an open system (spin-boson model) which interacts with an environment (ohmic or nonohmic) at arbitrary temperature. However there have been many assumptions about the time scale at which the geometric…
Modularity is designed to measure the strength of division of a network into clusters (known also as communities). Networks with high modularity have dense connections between the vertices within clusters but sparse connections between…
It is found experimentally that the coexistence region of a vapor-liquid system or a binary mixture is substantially narrowed when the fluid is confined in a aerogel with a high degree of porosity (e.g. of the order of 95% to 99%). A…
In this work we investigate the parallel computation of homology using the Mayer-Vietoris principle. We present a two stage approach for parallelizing persistence. In the first stage, we produce a cover of the input cell complex by…
Active polymer translocation through confined spaces is a key biological process underlying DNA transport through nuclear pores and actin filament dynamics in cell migration. Here, we use living polymer-like Tubifex tubifex worms as a model…
We use molecular dynamics simulations to study the dynamics of an ensemble of interacting self-propelled semi-flexible polymers in contact with a thermal bath. Our intention is to model complex systems of biological interest. We find that…
Using x-ray photon correlation spectroscopy, we studied the layer fluctuations in the lamellar phase of an ionic lyotropic system. We measured the relaxation rate of in-plane (undulation) fluctuations as a function of the wave vector.…
We discuss the pricing and hedging of volatility options in some rough volatility models. First, we develop efficient Monte Carlo methods and asymptotic approximations for computing option prices and hedge ratios in models where…