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Given two rooted phylogenetic trees on the same set of taxa X, the Maximum Agreement Forest problem (MAF) asks to find a forest that is, in a certain sense, common to both trees and has a minimum number of components. The Maximum Acyclic…

Combinatorics · Mathematics 2012-12-27 Leo van Iersel , Steven Kelk , Nela Lekić , Leen Stougie

We consider the maximum vertex-weighted matching problem (MVM), in which non-negative weights are assigned to the vertices of a graph, the weight of a matching is the sum of the weights of the matched vertices, and we are required to…

Data Structures and Algorithms · Computer Science 2018-10-12 Florin Dobrian , Mahantesh Halappanavar , Alex Pothen , Ahmed Al-Herz

The Bin Packing Problem is one of the most important optimization problems. In recent years, due to its NP-hard nature, several approximation algorithms have been presented. It is proved that the best algorithm for the Bin Packing Problem…

Data Structures and Algorithms · Computer Science 2015-08-07 Abdolahad Noori Zehmakan

We study the Steiner Tree problem, in which a set of terminal vertices needs to be connected in the cheapest possible way in an edge-weighted graph. This problem has been extensively studied from the viewpoint of approximation and also…

Data Structures and Algorithms · Computer Science 2026-02-19 Pavel Dvořák , Andreas Emil Feldmann , Dušan Knop , Tomáš Masařík , Tomáš Toufar , Pavel Veselý

Random Forests (RF) and Extreme Gradient Boosting (XGBoost) are two of the most widely used and highly performing classification and regression models. They aggregate equally weighted CART trees, generated randomly in RF or sequentially in…

Machine Learning · Computer Science 2025-10-28 Dimitris Bertsimas , Yubing Cui

Since the Bin Packing Problem (BPP) is one of the main NP-hard problems, a lot of approximation algorithms have been suggested for it. It has been proven that the best algorithm for BPP has the approximation ratio of 3/2 and the time order…

Discrete Mathematics · Computer Science 2016-10-28 Abdolahad Noori Zehmakan

In this paper, we study the $k$-forest problem in the model of resource augmentation. In the $k$-forest problem, given an edge-weighted graph $G(V,E)$, a parameter $k$, and a set of $m$ demand pairs $\subseteq V \times V$, the objective is…

Data Structures and Algorithms · Computer Science 2016-11-23 Eric Angel , Nguyen Kim Thang , Shikha Singh

The Steiner Forest problem, also known as the Generalized Steiner Tree problem, is a fundamental optimization problem on edge-weighted graphs where, given a set of vertex pairs, the goal is to select a minimum-cost subgraph such that each…

Data Structures and Algorithms · Computer Science 2025-04-16 Ali Ahmadi , Iman Gholami , MohammadTaghi Hajiaghayi , Peyman Jabbarzade , Mohammad Mahdavi

We study budget constrained network upgradeable problems. We are given an undirected edge weighted graph $G=(V,E)$ where the weight an edge $e \in E$ can be upgraded for a cost $c(e)$. Given a budget $B$ for improvement, the goal is to find…

Data Structures and Algorithms · Computer Science 2014-12-12 Debjyoti Saharoy , Sandeep Sen

A searcher is tasked with exploring a graph with edge lengths and vertex weights, starting from a designated vertex. Initially, only the starting vertex is considered explored. At each step, the searcher adds an edge to the solution,…

Data Structures and Algorithms · Computer Science 2025-05-13 Svenja M. Griesbach , Felix Hommelsheim , Max Klimm , Kevin Schewior

We present a simple 4-approximation algorithm for computing a maximum agreement forest of multiple unrooted binary trees. This algorithm applies LP rounding to an extension of a recent ILP formulation of the maximum agreement forest problem…

Data Structures and Algorithms · Computer Science 2024-09-16 Jordan Dempsey , Leo van Iersel , Mark Jones , Norbert Zeh

The Weighted Tree Augmentation problem (WTAP) is a fundamental problem in network design. In this paper, we consider this problem in the online setting. We are given an $n$-vertex spanning tree $T$ and an additional set $L$ of edges (called…

Data Structures and Algorithms · Computer Science 2019-04-29 Joseph , Naor , Seeun William Umboh , David P. Williamson

Quadratic assignment problems (QAPs) arise in a wide variety of domains, ranging from operations research to graph theory to computer vision to neuroscience. In the age of big data, graph valued data is becoming more prominent, and with it,…

The general Bandpass-$B$ problem is NP-hard and can be approximated by a reduction into the weighted $B$-set packing problem, with a worst case performance ratio of $O(B^2)$. When $B = 2$, a maximum weight matching gives a 2-approximation…

Data Structures and Algorithms · Computer Science 2013-07-29 Weitian Tong , Zhi-Zhong Chen , Lusheng Wang , Yinfeng Xu , Jiuping Xu , Randy Goebel , Guohui Lin

The minimum-weight $2$-edge-connected spanning subgraph (2-ECSS) problem is a natural generalization of the well-studied minimum-weight spanning tree (MST) problem, and it has received considerable attention in the area of network design.…

Data Structures and Algorithms · Computer Science 2019-06-04 Michal Dory , Mohsen Ghaffari

Our main result is designing an algorithm that returns a vertex cover of $\mathcal{G}^\star$ with size at most $(3/2+\epsilon)$ times the expected size of the minimum vertex cover, using only $O(n/\epsilon p)$ non-adaptive queries. This…

Data Structures and Algorithms · Computer Science 2023-02-07 Mahsa Derakhshan , Naveen Durvasula , Nika Haghtalab

In this paper, we study the weighted stochastic matching problem. Let $G=(V, E)$ be a given edge-weighted graph and let its realization $\mathcal{G}$ be a random subgraph of $G$ that includes each edge $e\in E$ independently with a known…

Data Structures and Algorithms · Computer Science 2023-11-16 Mahsa Derakhshan , Mohammad Saneian

We present four novel approximation algorithms for finding triangulation of minimum treewidth. Two of the algorithms improve on the running times of algorithms by Robertson and Seymour, and Becker and Geiger that approximate the optimum by…

Data Structures and Algorithms · Computer Science 2013-01-14 Eyal Amir

Constrained Forest Problems (CFPs) as introduced by Goemans and Williamson in 1995 capture a wide range of network design problems with edge subsets as solutions, such as Minimum Spanning Tree, Steiner Forest, and Point-to-Point Connection.…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-07-23 Corinna Coupette , Alipasha Montaseri , Christoph Lenzen

Graph connectivity and network design problems are among the most fundamental problems in combinatorial optimization. The minimum spanning tree problem, the two edge-connected spanning subgraph problem (2-ECSS) and the tree augmentation…

Data Structures and Algorithms · Computer Science 2020-01-14 David Adjiashvili , Felix Hommelsheim , Moritz Mühlenthaler
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