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We propose a new approach for clustering DNA features using array CGH data from multiple tumor samples. We distinguish data-collapsing: joining contiguous DNA clones or probes with extremely similar data into regions, from clustering:…

Applications · Statistics 2010-12-21 Kyung In Kim , Etienne Roquain , Mark Van De Wiel

Classification model selection is a process of identifying a suitable model class for a given classification task on a dataset. Traditionally, model selection is based on cross-validation, meta-learning, and user preferences, which are…

Machine Learning · Computer Science 2023-05-24 Sudarsun Santhiappan , Nitin Shravan , Balaraman Ravindran

We address the problem of cluster identity estimation in a hierarchical federated learning setting in which users work toward learning different tasks. To overcome the challenge of task heterogeneity, users need to be grouped in a way such…

Machine Learning · Computer Science 2024-10-04 Abdulmoneam Ali , Ahmed Arafa

We propose a simple and efficient clustering method for high-dimensional data with a large number of clusters. Our algorithm achieves high-performance by evaluating distances of datapoints with a subset of the cluster centres. Our…

Machine Learning · Computer Science 2022-03-30 Georgios Exarchakis , Omar Oubari , Gregor Lenz

We present a new clustering method in the form of a single clustering equation that is able to directly discover groupings in the data. The main proposition is that the first neighbor of each sample is all one needs to discover large chains…

Computer Vision and Pattern Recognition · Computer Science 2019-03-01 M. Saquib Sarfraz , Vivek Sharma , Rainer Stiefelhagen

Clustering is an essential technique for network analysis, with applications in a diverse range of fields. Although spectral clustering is a popular and effective method, it fails to consider higher-order structure and can perform poorly on…

Social and Information Networks · Computer Science 2020-09-14 William George Underwood , Andrew Elliott , Mihai Cucuringu

Clustering large, mixed data is a central problem in data mining. Many approaches adopt the idea of k-means, and hence are sensitive to initialisation, detect only spherical clusters, and require a priori the unknown number of clusters. We…

Machine Learning · Statistics 2020-11-13 Joshua Tobin , Mimi Zhang

Clustering is an essential data mining tool that aims to discover inherent cluster structure in data. For most applications, applying clustering is only appropriate when cluster structure is present. As such, the study of clusterability,…

Machine Learning · Statistics 2018-10-30 A. Adolfsson , M. Ackerman , N. C. Brownstein

Unsupervised Anomaly Detection (UAD) plays a crucial role in identifying abnormal patterns within data without labeled examples, holding significant practical implications across various domains. Although the individual contributions of…

Machine Learning · Computer Science 2024-06-04 Zeyu Fang , Ming Gu , Sheng Zhou , Jiawei Chen , Qiaoyu Tan , Haishuai Wang , Jiajun Bu

A general scheme for divisive hierarchical clustering algorithms is proposed. It is made of three main steps : first a splitting procedure for the subdivision of clusters into two subclusters, second a local evaluation of the bipartitions…

Data Structures and Algorithms · Computer Science 2018-09-07 Maurice Roux

Clustering is a concept used in a huge variety of applications. We review a conceptually very simple algorithm for hierarchical clustering called in the following the {\it mutual information clustering} (MIC) algorithm. It uses mutual…

Quantitative Methods · Quantitative Biology 2008-09-10 Alexander Kraskov , Peter Grassberger

Clustering algorithms start with a fixed divergence, which captures the possibly asymmetric distance between a sample and a centroid. In the mixture model setting, the sample distribution plays the same role. When all attributes have the…

Machine Learning · Computer Science 2017-01-10 Mehmet Emin Basbug , Barbara Engelhardt

Spectral clustering is a powerful method for finding structure in a dataset through the eigenvectors of a similarity matrix. It often outperforms traditional clustering algorithms such as $k$-means when the structure of the individual…

Numerical Analysis · Mathematics 2019-04-26 Paola Favati , Grazia Lotti , Ornella Menchi , Francesco Romani

Affinity propagation is an exemplar-based clustering algorithm that finds a set of data-points that best exemplify the data, and associates each datapoint with one exemplar. We extend affinity propagation in a principled way to solve the…

Machine Learning · Computer Science 2012-02-20 Inmar Givoni , Clement Chung , Brendan J. Frey

We introduce an unsupervised approach to efficiently discover the underlying features in a data set via crowdsourcing. Our queries ask crowd members to articulate a feature common to two out of three displayed examples. In addition we also…

Machine Learning · Statistics 2015-04-02 James Y. Zou , Kamalika Chaudhuri , Adam Tauman Kalai

Large datasets with interactions between objects are common to numerous scientific fields (i.e. social science, internet, biology...). The interactions naturally define a graph and a common way to explore or summarize such dataset is graph…

Applications · Statistics 2009-10-13 Hugo Zanghi , Stevenn Volant , Christophe Ambroise

Recently there has been an increase in the studies on time-series data mining specifically time-series clustering due to the vast existence of time-series in various domains. The large volume of data in the form of time-series makes it…

Machine Learning · Computer Science 2019-12-06 Hossein Kamalzadeh , Abbas Ahmadi , Saeed Mansour

Importance of document clustering is now widely acknowledged by researchers for better management, smart navigation, efficient filtering, and concise summarization of large collection of documents like World Wide Web (WWW). The next…

Information Retrieval · Computer Science 2011-12-30 Muhammad Rafi , M. Shahid Shaikh , Amir Farooq

Many cluster similarity indices are used to evaluate clustering algorithms, and choosing the best one for a particular task remains an open problem. We demonstrate that this problem is crucial: there are many disagreements among the…

Discrete Mathematics · Computer Science 2021-08-27 Martijn Gösgens , Alexey Tikhonov , Liudmila Prokhorenkova

Spectral clustering has gained importance in recent years due to its ability to cluster complex data as it requires only pairwise similarity among data points with its ease of implementation. The central point in spectral clustering is the…

Computer Vision and Pattern Recognition · Computer Science 2017-04-11 Lalith Srikanth Chintalapati , Raghunatha Sarma Rachakonda