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Automatic segmentation of medical images is a key step for diagnostic and interventional tasks. However, achieving this requires large amounts of annotated volumes, which can be tedious and time-consuming task for expert annotators. In this…

Whole-body PET/CT is a cornerstone of oncological imaging, yet accurate lesion segmentation remains challenging due to tracer heterogeneity, physiological uptake, and multi-center variability. While fully automated methods have advanced…

Computer Vision and Pattern Recognition · Computer Science 2025-09-01 Maximilian Rokuss , Yannick Kirchhoff , Fabian Isensee , Klaus H. Maier-Hein

Intra-operative ultrasound is an increasingly important imaging modality in neurosurgery. However, manual interaction with imaging data during the procedures, for example to select landmarks or perform segmentation, is difficult and can be…

Computer Vision and Pattern Recognition · Computer Science 2019-04-19 Julia Rackerseder , Rüdiger Göbl , Nassir Navab , Christoph Hennersperger

For complex segmentation tasks, the achievable accuracy of fully automated systems is inherently limited. Specifically, when a precise segmentation result is desired for a small amount of given data sets, semi-automatic methods exhibit a…

Human-Computer Interaction · Computer Science 2019-09-04 Mario Amrehn , Stefan Steidl , Reinier Kortekaas , Maddalena Strumia , Markus Weingarten , Markus Kowarschik , Andreas Maier

Semantic segmentation neural networks require pixel-level annotations in large quantities to achieve a good performance. In the medical domain, such annotations are expensive, because they are time-consuming and require expert knowledge.…

Computer Vision and Pattern Recognition · Computer Science 2024-10-28 Grzegorz Chlebus , Andrea Schenk , Horst K. Hahn , Bram van Ginneken , Hans Meine

Among all types of cancer, gynecological malignancies belong to the 4th most frequent type of cancer among women. Besides chemotherapy and external beam radiation, brachytherapy is the standard procedure for the treatment of these…

Computer Vision and Pattern Recognition · Computer Science 2016-08-24 Tobias Lüddemann , Jan Egger

Automatic fetal brain tissue segmentation can enhance the quantitative assessment of brain development at this critical stage. Deep learning methods represent the state of the art in medical image segmentation and have also achieved…

Image and Video Processing · Electrical Eng. & Systems 2023-01-05 Davood Karimi , Caitlin K. Rollins , Clemente Velasco-Annis , Abdelhakim Ouaalam , Ali Gholipour

3D volume segmentation is a fundamental task in many scientific and medical applications. Producing accurate segmentations efficiently is challenging, in part due to low imaging data quality (e.g., noise and low image resolution) and…

Human-Computer Interaction · Computer Science 2020-04-08 Anahita Sanandaji , Cindy Grimm , Ruth West , Max Parola , Meghan Kajihara , Kathryn Hays , Luke Hillard , Brandon Lane , Molly Beyer

Many deep learning based automated medical image segmentation systems, in reality, face difficulties in deployment due to the cost of massive data annotation and high latency in model iteration. We propose a dynamic interactive learning…

Computer Vision and Pattern Recognition · Computer Science 2023-12-12 Mu Tian , Xiaohui Chen , Yi Gao

Segmentation of COVID-19 lesions from chest CT scans is of great importance for better diagnosing the disease and investigating its extent. However, manual segmentation can be very time consuming and subjective, given the lesions' large…

Image and Video Processing · Electrical Eng. & Systems 2021-01-14 Simone Bendazzoli , Irene Brusini , Mehdi Astaraki , Mats Persson , Jimmy Yu , Bryan Connolly , Sven Nyrén , Fredrik Strand , Örjan Smedby , Chunliang Wang

Background and Objective: Biometric measurements of fetal head are important indicators for maternal and fetal health monitoring during pregnancy. 3D ultrasound (US) has unique advantages over 2D scan in covering the whole fetal head and…

Image and Video Processing · Electrical Eng. & Systems 2020-04-29 Xin Yang , Xu Wang , Yi Wang , Haoran Dou , Shengli Li , Huaxuan Wen , Yi Lin , Pheng-Ann Heng , Dong Ni

In this contribution, a semi-automatic segmentation algorithm for (medical) image analysis is presented. More precise, the approach belongs to the category of interactive contouring algorithms, which provide real-time feedback of the…

Computer Vision and Pattern Recognition · Computer Science 2014-06-10 Jan Egger

Training segmentation models for medical images continues to be challenging due to the limited availability of data annotations. Segment Anything Model (SAM) is a foundation model that is intended to segment user-defined objects of interest…

Computer Vision and Pattern Recognition · Computer Science 2023-08-09 Maciej A. Mazurowski , Haoyu Dong , Hanxue Gu , Jichen Yang , Nicholas Konz , Yixin Zhang

Objectives: To evaluate the zero-shot performance of Segment Anything Model 2 (SAM 2) in 3D segmentation of abdominal organs in CT scans, and to investigate the effects of prompt settings on segmentation results. Materials and Methods: In…

Image and Video Processing · Electrical Eng. & Systems 2025-05-13 Yosuke Yamagishi , Shouhei Hanaoka , Tomohiro Kikuchi , Takahiro Nakao , Yuta Nakamura , Yukihiro Nomura , Soichiro Miki , Takeharu Yoshikawa , Osamu Abe

Segment anything model (SAM) demonstrates strong generalization ability on natural image segmentation. However, its direct adaptation in medical image segmentation tasks shows significant performance drops. It also requires an excessive…

Computer Vision and Pattern Recognition · Computer Science 2024-12-19 Heng Guo , Jianfeng Zhang , Jiaxing Huang , Tony C. W. Mok , Dazhou Guo , Ke Yan , Le Lu , Dakai Jin , Minfeng Xu

3D part segmentation is still an open problem in the field of 3D vision and AR/VR. Due to limited 3D labeled data, traditional supervised segmentation methods fall short in generalizing to unseen shapes and categories. Recently, the…

Computer Vision and Pattern Recognition · Computer Science 2025-02-28 Keito Suzuki , Bang Du , Girish Krishnan , Kunyao Chen , Runfa Blark Li , Truong Nguyen

Segmentation is essential for medical image analysis tasks such as intervention planning, therapy guidance, diagnosis, treatment decisions. Deep learning is becoming increasingly prominent for segmentation, where the lack of annotations,…

Computer Vision and Pattern Recognition · Computer Science 2019-03-19 Firat Ozdemir , Zixuan Peng , Christine Tanner , Philipp Fuernstahl , Orcun Goksel

From the simple measurement of tissue attributes in pathology workflow to designing an explainable diagnostic/prognostic AI tool, access to accurate semantic segmentation of tissue regions in histology images is a prerequisite. However,…

Image and Video Processing · Electrical Eng. & Systems 2021-08-31 Mostafa Jahanifar , Neda Zamani Tajeddin , Navid Alemi Koohbanani , Nasir Rajpoot

We present iSeg, a new interactive technique for segmenting 3D shapes. Previous works have focused mainly on leveraging pre-trained 2D foundation models for 3D segmentation based on text. However, text may be insufficient for accurately…

Computer Vision and Pattern Recognition · Computer Science 2024-10-29 Itai Lang , Fei Xu , Dale Decatur , Sudarshan Babu , Rana Hanocka

The increasing availability of digital 3D environments, whether through image-based 3D reconstruction, generation, or scans obtained by robots, is driving innovation across various applications. These come with a significant demand for 3D…

Computer Vision and Pattern Recognition · Computer Science 2025-04-16 Andrea Simonelli , Norman Müller , Peter Kontschieder